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SCN18_10_11_15_R1_P_scaffold_10014_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1..894

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003745DF6 similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 278.0
  • Bit_score: 392
  • Evalue 2.00e-106
GMC family oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 278.0
  • Bit_score: 396
  • Evalue 3.90e-108
GMC family oxidoreductase {ECO:0000313|EMBL:AJC44533.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 278.0
  • Bit_score: 396
  • Evalue 1.90e-107

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
TTGAACTGGAGCTACGACACCGCCCCGGAACCCCAGCTGCAGGGCCGGCGGCTCTGGTGGCCGCGCGGCAAGGTGCTGGGCGGCTCCAGTTCGATCAACGCCATGTGCTATGTGCGCGGCGTGCCCGGCGACTACGACCGCTGGGCCGCTGCCGGCGCCACCGGCTGGGACTGGGCAGGCGTCCTGCCCTGGTTCCTCCACAGCGAGTGCAACGGCCGTGGCGGCGATGCGCTGCACGGCGATGCCGGCCCGCTGCACGTTTCCGACCTGCGTCACGTCAACCCGCTCAGCCACGCCTTCATCGAAGCCGGCGTGCAGGCCGGGCATGCGCACAATCACGATTTCAACGGCGACCAGCAGCTTGGCGTCGGCCTGTACCAGGTCACGCAGAAGGATGGCGCGCGCTGTTCGTCGGCCACGGCCTACCTGGCGCCGGTACGGCAACGCCGCAACCTGCAGGTGCTGACCGGCGCGCTGGTCGAACGCATCCTGATCGACGCCGGCCGCGCGCATGGCATCGTCCTGCGCCGCGGCGGGCAGCAACAGCGCGTGCATGCGCGGCGCGAGGTACTGCTCAGCGCCGGCGCGATCAATTCGCCGCAACTGCTGATGCTCTCCGGCATAGGCCCGGCCGACGCGCTGCGCGCGCACGGGATCACGGTGCAGCTCGACCAGCCCCAGGTCGGCGCCAACCTGCAGGACCACCTGGACATCTGCACGCTGTACCGCACCGTGCCCGGCGTCAGCTACGACCGCGCCAGCCCTGCGGGCATGTGGATGAACGGGTGGCGGTCGCGCGGGCCGGCCTCGACCAGCAGCACCTGCACCTGTGGATCGGCGCTGAGCCGGTTGGCCAGCACGCAGCCGGCCGAGCCGGCGCCGACGATGATGTAA
PROTEIN sequence
Length: 298
LNWSYDTAPEPQLQGRRLWWPRGKVLGGSSSINAMCYVRGVPGDYDRWAAAGATGWDWAGVLPWFLHSECNGRGGDALHGDAGPLHVSDLRHVNPLSHAFIEAGVQAGHAHNHDFNGDQQLGVGLYQVTQKDGARCSSATAYLAPVRQRRNLQVLTGALVERILIDAGRAHGIVLRRGGQQQRVHARREVLLSAGAINSPQLLMLSGIGPADALRAHGITVQLDQPQVGANLQDHLDICTLYRTVPGVSYDRASPAGMWMNGWRSRGPASTSSTCTCGSALSRLASTQPAEPAPTMM*