ggKbase home page

SCN18_10_11_15_R1_P_scaffold_3104_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(1084..2343)

Top 3 Functional Annotations

Value Algorithm Source
TolC family type I secretion outer membrane protein n=2 Tax=Stenotrophomonas maltophilia RepID=M5THL3_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 411.0
  • Bit_score: 635
  • Evalue 3.30e-179
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 411.0
  • Bit_score: 635
  • Evalue 4.60e-179
tolC; outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 411.0
  • Bit_score: 632
  • Evalue 7.80e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
GGCGATCCGCAGCTGGCCTCCGCAGAATCCAACCGGCTGTACACCAAGGAAGGCCAGGTGCAGGCCCGCGCCAACCTGCTGCCGTCGCTGAACGGCCAGGCCACGCTCAACCGCGCCCGCACCTCGCAGGACGGCGTCAGTGGCTCGAGCACCACCACCTCGCGCAAGTACGGCATCTCCGGTGAGCAGACCCTGTTCAACTGGACCCAGTTCGCCAACCTGCGCGCCCAGCGCGAGATCAGCAAGGCGGCCGACTTCGACCTCGAATCGGCCAACGACGACCTGATCGTGCGTACCGCGACCACTTATTTCAACGTGCTGGTGGCGATCGAATCGCTCAGCGCCGCGCAGACCAACGAGGCGGCCGCCAAGAAGCAGTTCGACTACGCGGACAAGCGCCTGGAAGTGGGCCTGGCGCCGATCACCGACGTGCACGAAGCCCGCGCCCAGTACGACCAGGCGCGCGCCAACACCATCCTCGCCCGCAATACCCTGGCCGACGCCTACCAGGCGCTGACCGAACTGACCGGCCAGCCGGTGCAGGGCCTGCGCAGCCTGCCGGAAGATTTCCGTCCGGAACTGCCGGCCAACCGCGGCGACGTCGACAGGCTGGTGGCCGATGCGATCACCCAGAACCCGGCGCTGAAGGCGCAGGAACTGAAGGTCAACGCCGCCGAATCCAGCGTCTCGGCCGCCCGCGGCGGTCACTACCCGACCCTGTCGCTGGGCGGCAGCTGGGGCAAGAGCGCCAGTTGGGGCGACAGCGTCGGCGCGTCGTCTTCCGGACCGGATACGACTACCAACTCGATCGGCCTGACCCTTAACGTGCCGTTCTTCGCCGGCGGCGCCACCCAGTCCTATGTGCGCCAGGCCCTGGCCCAGCGCGACATGGCCCAGGACGGCTACGAGCAGCAGAAGCGCGCGCTGGACCGCAATACCCGCAACGCCTACCAGGCGGTGGTGGCCGGCATCAGCGAAGTGGAAGCGCGCCGCCTGGCCGTGGTGTCCGCGCAGAGCGCCTATGACGCCTCGCAGGTCGGCCTGGAGGTCGGTACCCGTACCGTGCTGGACGTGGTGCAGAACCAGCGCACCCTGTTCCAGGCCAAGCTCGACTACGCACAGGCCCGCTACAACTTCCTGCTCAGCCGCCTGCAGCTCAGCCAGGCCATCGGCGGGCTGGACGTGGCCGAGGTGCAGGACGTCAACCGCCTGCTGACCCAGTATGCCGAAGCCCAGCTGGCACCGGGCAGCATGCAGTAA
PROTEIN sequence
Length: 420
GDPQLASAESNRLYTKEGQVQARANLLPSLNGQATLNRARTSQDGVSGSSTTTSRKYGISGEQTLFNWTQFANLRAQREISKAADFDLESANDDLIVRTATTYFNVLVAIESLSAAQTNEAAAKKQFDYADKRLEVGLAPITDVHEARAQYDQARANTILARNTLADAYQALTELTGQPVQGLRSLPEDFRPELPANRGDVDRLVADAITQNPALKAQELKVNAAESSVSAARGGHYPTLSLGGSWGKSASWGDSVGASSSGPDTTTNSIGLTLNVPFFAGGATQSYVRQALAQRDMAQDGYEQQKRALDRNTRNAYQAVVAGISEVEARRLAVVSAQSAYDASQVGLEVGTRTVLDVVQNQRTLFQAKLDYAQARYNFLLSRLQLSQAIGGLDVAEVQDVNRLLTQYAEAQLAPGSMQ*