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SCN18_10_11_15_R1_P_scaffold_3254_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 2..817

Top 3 Functional Annotations

Value Algorithm Source
GGDEF signaling protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E134E3 similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 271.0
  • Bit_score: 417
  • Evalue 6.90e-114
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 271.0
  • Bit_score: 417
  • Evalue 2.60e-114
Strain LMCP11 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26515.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 271.0
  • Bit_score: 417
  • Evalue 1.30e-113

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
GAACGCACCGCCCTGCAGGCGCGGCTGCTCGCCGACGGCGTGGCCGCCTACCAGGGCAACGGCGATGCCGCCGCGCAGGAACACCTGGCCCTGCTGGAAGGCCAGATCGAGCTGGCCTACCAGCCGATCGTGGCCGTCGCCGGCAGCGACACCGCGCAGTACCAGGTGCTGCTGCGCCTGCGGCGCAACGACGGCACCCTGCTCTCGGCCGGCCAGGTGATTCCGGCGGCCGAGGCGGCCGGGCGCATCGGCGACCTCGACCAGCAGGTGCTCGACCATGCGCTGGGGCTGCTGCACCGCTACCAGCACGCCGTGCCGCCGATGCGGCTGTTCGTGTCGCAGTCGCTGCGCAGCCTCGCCCGCGAGGCATTCGCCGGCTGGCTGCTCAAGGCCATCGCCGACCGGCAGATCGCCGGCAGCTCGCTGGTCATCGACGTGCGCCTGGGCGACGCGCTGGTACACGCGGTGACGCTGCAGCAGTTCTGCGAACGGCTGATGCCCGCCGGCGTGCAGTTCTGCCTGAGCCAGTTCGAACCCGGCGACGAGGCCAACGCGCTGATGACCCAGCTGCCGCTGGGCTTCGTGCGCATGGCCGGGCGTTTCGCCGGCAGCCACGCCAGCCAGCAGCTGCGCGACGAACTGCGCGGCGCGATCGACGCCGCGCACCGCGCCGGGCTGCAGATCATCGGCCAGCAGATCGAGGATCCACAGGCCGCCGCCGCGATGTGGATGAGCGGCATCGACTTCATCCAGGGCAACGTGGTGCAGTCGGTCGGCAGCGAACTGGACTTCGACTTCCAGAACACGGTGCTCTGA
PROTEIN sequence
Length: 272
ERTALQARLLADGVAAYQGNGDAAAQEHLALLEGQIELAYQPIVAVAGSDTAQYQVLLRLRRNDGTLLSAGQVIPAAEAAGRIGDLDQQVLDHALGLLHRYQHAVPPMRLFVSQSLRSLAREAFAGWLLKAIADRQIAGSSLVIDVRLGDALVHAVTLQQFCERLMPAGVQFCLSQFEPGDEANALMTQLPLGFVRMAGRFAGSHASQQLRDELRGAIDAAHRAGLQIIGQQIEDPQAAAAMWMSGIDFIQGNVVQSVGSELDFDFQNTVL*