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SCN18_10_11_15_R1_P_scaffold_9084_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 3..308

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003075E60 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 93.0
  • Bit_score: 157
  • Evalue 3.70e-36
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 96.0
  • Bit_score: 153
  • Evalue 1.30e-34
transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 94.0
  • Bit_score: 151
  • Evalue 1.30e-34

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
TACCTGAGCAAGCGCCTGGAAGCGCTGCGGGTGGTGGACACACGTCCAAGCGACCCGGAAGCGGTGTTCTTCGGTGCGACGGTGGAGCTGGAGAACGTGCAGTCCGGCCAGACCCACGTCTACCGCATCGTCGGCCCGGACGAGACCGACGCGACGGCCGGCTGGATCAGCATCGATTCGCCACTGGCCCGCGCCCTGCTGAAAAAGCGCATCGACGACGAATTCGAGGTGGAACTGCCGGGCGGGCGGCAGGCCTTCGCCATCGTCGGCATCGACTACGTGGTGGGTCCGCAGGGGCCGGCATAA
PROTEIN sequence
Length: 102
YLSKRLEALRVVDTRPSDPEAVFFGATVELENVQSGQTHVYRIVGPDETDATAGWISIDSPLARALLKKRIDDEFEVELPGGRQAFAIVGIDYVVGPQGPA*