ggKbase home page

SCN18_10_11_15_R1_P_scaffold_10391_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 707..1096

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 130.0
  • Bit_score: 230
  • Evalue 1.10e-57
RNA helicase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000300A86F similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 130.0
  • Bit_score: 226
  • Evalue 1.40e-56
deaD; DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 130.0
  • Bit_score: 222
  • Evalue 4.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGTCCCAAGAAACCCCCGCGCCGCTGCTGTTCGCAGATCTCGGCCTCTCAGAGCCTGTGATGAAAGCGGTCGCCGACGTCGGTTACGAGACCCCGTCGCCCATCCAGGCCGCCACCATCCCGGCGATGCTGGAAGGCCGCGACGTGCTCGGCCAGGCGCAGACCGGTACCGGCAAGACCGGCGCCTTCGCGCTGCCGGTGCTGTCCAACATCGACCTTTCCGCTACCAAGCCGCAGGTGCTGGTGCTGGCGCCGACCCGCGAGCTGGCCATCCAGGTCGCCGAGGCGTTCCAGACCTATTCGGCCTCGATGCCCGGCTTCCGCGTGCTGCCGGTGTACGGCGGCCAGCCGTACGGCCAGCAGCTGTCGGCGCTGCGCCGTGGCGTGCAC
PROTEIN sequence
Length: 130
MSQETPAPLLFADLGLSEPVMKAVADVGYETPSPIQAATIPAMLEGRDVLGQAQTGTGKTGAFALPVLSNIDLSATKPQVLVLAPTRELAIQVAEAFQTYSASMPGFRVLPVYGGQPYGQQLSALRRGVH