ggKbase home page

SCN18_10_11_15_R1_P_scaffold_10497_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(2..1087)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036414E1 similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 364.0
  • Bit_score: 486
  • Evalue 1.60e-134
TonB-dependent receptor {ECO:0000313|EMBL:EZP46022.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 365.0
  • Bit_score: 469
  • Evalue 2.20e-129
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 364.0
  • Bit_score: 463
  • Evalue 3.20e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ACCGCGCTGCAGGCCACGATGCAGGTGGAGGTGATCGAGCGCGAGGACATACGCCGCAGCGGCTACGGCTCGCTGTTCGACCTGCTGCGCCACCTGCCCGGCATGAACGGGCGGCCACCGGTGGATGCCTCGCGCGACGGCGATTCGCCCTATCTTCCCGGCGGCGCCGCCGCGGCCACCAGCCTGGACGGGATGGGCCCGCGCGCCACCCTGTTCCTGGTCAATGGCCGGCGCCTGCCGCGCTATCCCATGGTGTCGCTGCAGCAGGGCGCCCTCACCGACCTGGGCGGGCTGCCGCTGAGCTTCGTCGAACGCATCGAACTGGTCCGTGGCGGCGCCTCGGCCATCTACGGCGCCGATGCCATGGCCGGCGTGGTCAACATCGTGCTGCGCGACCAGGCCGACGGCCCCGAAGCCATGCTGCAGACCGGCATCAGCAACCAGGGCGACGGCGCCCAGTACCGGATGCAGGCCGCCACCGGCAATGGCGGTGCAGGCGACGACTGGTTCCTCGGCATCGACCTGCAGCAGACCGACCACGTCGCCGGCGACCGCCGCGCCTGGCACCGCGAACGGCAACGCTATCCGATCGGCCTGCTGACCCGCGACGGGTACTACCTGCCGGCCTACCTGTGCCCGTCGGGCATGCGCGAGGACAGCGGCTGCTGGTACGACAGTTCGCGCCCGCGCTCGCTGCAGCCAGCCTCCTCCTCCGCCGCCGCCTACGGCCATTGGCGGCACGACGCGGGCAACGGCCTGCACGCCCATGCCGAACTGCGCGCCAGCCTTGCCCGCCAGCGCTACGAACTGGGGCCGACGGCGGCGGCCCTGCGCCTGGCCGATGGCAGCCTGATCAACCATGTGTTCCAGGAAGGCGGCAGCGTGCGCCCGGCGATCCGCAGCCTCGAACTGGACCTTGCAGCCGGCATCGGCCGCGACCGCGGCGACGCCGGCTGGGAAGCGGGGCTGAGCCGGCAACGCAGCGAAACCACGCTGTCGACCGAGGGCGCGGTGCGTAGCGCGCGGCTGTTCGATGCCGTGGCGAACGGCTACATCCCGGGATTCACACCGCTGGACCCGGCCCTG
PROTEIN sequence
Length: 362
TALQATMQVEVIEREDIRRSGYGSLFDLLRHLPGMNGRPPVDASRDGDSPYLPGGAAAATSLDGMGPRATLFLVNGRRLPRYPMVSLQQGALTDLGGLPLSFVERIELVRGGASAIYGADAMAGVVNIVLRDQADGPEAMLQTGISNQGDGAQYRMQAATGNGGAGDDWFLGIDLQQTDHVAGDRRAWHRERQRYPIGLLTRDGYYLPAYLCPSGMREDSGCWYDSSRPRSLQPASSSAAAYGHWRHDAGNGLHAHAELRASLARQRYELGPTAAALRLADGSLINHVFQEGGSVRPAIRSLELDLAAGIGRDRGDAGWEAGLSRQRSETTLSTEGAVRSARLFDAVANGYIPGFTPLDPAL