ggKbase home page

SCN18_10_11_15_R1_P_scaffold_10547_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(677..1084)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B77EEA similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 135.0
  • Bit_score: 241
  • Evalue 3.40e-61
Integrase {ECO:0000313|EMBL:AKC78177.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 135.0
  • Bit_score: 241
  • Evalue 4.70e-61
integrase similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 135.0
  • Bit_score: 238
  • Evalue 1.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
GCGTTTGGCTCCATCGAGTCTGACGAGCGTGGGAGCAGCGCCAGCAGGGCCTTGCTGCAGGCACTGCGCTACTACCGGCAGTTGGGTGTGCGCTTCGAGCGGGTCCTGGCCGACAATGGGGCTTGCTACAGATCGCACCGATTCCGCCGCCTGCTCCGCCGGCTCGGCCTGCGCCACCTGCGCACACGGCCCTATACGCCTCGTACCAACGGCAAGGCCGAGCGCCTGGTCCAGACCAGCCTGCGTGAATGGGCCTATGCCCGCGCCTATGACAACTCCGGGCAGCGTGCCGATGCGCTCCACGACTGGCTGCATCACTACAACTGGCACCGGCCCCATGCCAGCCTCGGTTACAAGCCGCCCATCTCCCGAATACCGCTGAACAACCTGCTGGGTTTACACAGCTAG
PROTEIN sequence
Length: 136
AFGSIESDERGSSASRALLQALRYYRQLGVRFERVLADNGACYRSHRFRRLLRRLGLRHLRTRPYTPRTNGKAERLVQTSLREWAYARAYDNSGQRADALHDWLHHYNWHRPHASLGYKPPISRIPLNNLLGLHS*