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SCN18_10_11_15_R4_B_scaffold_100_105

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 125626..126678

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE955F related cluster n=1 Tax=unknown RepID=UPI0003CE955F similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 355.0
  • Bit_score: 389
  • Evalue 2.00e-105
Type VI secretion protein {ECO:0000313|EMBL:ESY84255.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 355.0
  • Bit_score: 389
  • Evalue 2.80e-105
type VI secretion system fha domain protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 359.0
  • Bit_score: 386
  • Evalue 8.10e-105

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGGAAATCGTTCTGACCGTCGAGAACGCTGAAAACCTGCCGGACGGAGCGCAGGCCGCATTCCGCGCGCGGGACCGCGGCTTCGGCGTCGGCCGCGCGGATGCGGACTGGACGCTGCCGGACCCGGAGATGATCGTTTCCGGCCGGCATTGCGAGATACGGTTCGATCCGGCGTCCGGGTTCTGGCTGGAGGACGTTTCCCGCAACGGCACGTATCTCAACGGCTCGCGGCAGCGGCTGGCCGAACCATATCTCCTGAAATCCGGCGACCGGCTGCGCATCGGGCGCTACATCGTCCAGGTCGCCGTCGATGCCGTGGAACTGCCGGTGGCCGCCGCGCCGGCAGCGGCGCCCGGCAACGACTTCATGGCGCCCGTCGACACGGGCCCGGCCTATCCGCCGTCCGAGCTGCCGCCACAGCAGGCCGATATCCCCGCCCCCTCCGGGCGGCGCATACTGTCGCCCGGAGGGCCCCCGCCGGGCCAGGCCGACATCCTGCGGGAGATCGCGGCCGGCGCCGGCATCTCCCCCGAGGTGTTCCAGAGCCGCGACGCCCGCGAGGTCGCCGCCGAGATCGGCGTCGTGCTGCGGATCGTGGTCGAGGAGCTTTCGGCGATGCTGAAGGCGCGCGCCGCCGCCAAGATGATGACCAAGAGCGGCCACCAGACGATGATCAGCAGCGCCGGCAACAATCCGCTCAAGTTCGTCCCCGGCGCCGAGGAGATGCTGGAGAAGATGTTCTCGCGCCGGTCGGCCGGCTATCTCGACGCCAAGGGCAGCCTGGAGGACGCGTTCCGGGACCTGAAGACGCACGAGATCGCCACCTATGCGGCGATGCAGGCGGCGCTGTCGCGGCTGATGGAGGAACTGTCCCCCGAAACCATCGAGAAGCGCGTGGCGCCCTCGTCCTTCGGCTCGAAACGCGGCCGGTCGTGGGACGCATTCGTGAAGGCGTGGGAAGCGCGCGAACAGGCGCACGAGAACGGGATGCTGGACGTGTTCCTCGCCTATTTCAGCGAAAGCTACGCGTCCGCCTCGAAGTCGCGGAAATAG
PROTEIN sequence
Length: 351
MEIVLTVENAENLPDGAQAAFRARDRGFGVGRADADWTLPDPEMIVSGRHCEIRFDPASGFWLEDVSRNGTYLNGSRQRLAEPYLLKSGDRLRIGRYIVQVAVDAVELPVAAAPAAAPGNDFMAPVDTGPAYPPSELPPQQADIPAPSGRRILSPGGPPPGQADILREIAAGAGISPEVFQSRDAREVAAEIGVVLRIVVEELSAMLKARAAAKMMTKSGHQTMISSAGNNPLKFVPGAEEMLEKMFSRRSAGYLDAKGSLEDAFRDLKTHEIATYAAMQAALSRLMEELSPETIEKRVAPSSFGSKRGRSWDAFVKAWEAREQAHENGMLDVFLAYFSESYASASKSRK*