ggKbase home page

SCN18_10_11_15_R4_B_scaffold_231_52

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 54378..55016

Top 3 Functional Annotations

Value Algorithm Source
Long-chain-fatty-acid--CoA ligase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHC7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 204.0
  • Bit_score: 233
  • Evalue 1.90e-58
TetR family transcriptional regulator {ECO:0000313|EMBL:EXS71885.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 206.0
  • Bit_score: 233
  • Evalue 2.00e-58
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 207.0
  • Bit_score: 216
  • Evalue 5.20e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
GTGGCATCTTCGGCGAAGGCGCTGTGGCCGAGCGTGGAGGACAGGGAGCGCGAGCGGCGCGAGAAGCGCGAGGCCGTGCTGCATGCCGCCGTGCGCTCGTTCAACGAGAAGGGCTTTCATGCCACCTCGCTCGACGACGTGGCGAATGCGCTCAACGTCACCAAGCCGACGATCTACCACTACTTCGCCAACAAGGACGAAATCCTGTTCGAGTGCGTGCGGCGCGGGCTGGACAGCATCCGCCACGCCGCCGAGGCGGTGGAATCGGAGGGCGGCGGCGGCCTGGAGCGCCTGAGGCGCCTGATGCGCGACTACGCAATCATCATGACGCGGGATTTCGGCATGTGCGTCACGCGCACGGCCGACCACGAGCTGTCGGGCGACAGCCGCGCCAAGTTCCGGGCGCTCAAGCGCGAGATCGACCAAACCGTGCGCCGCGTGGTCGAACAGGGCATGGCCGACGGCAGCATCGCGGGCGGCGATCCCCGCCTCGTGACCTTCACGCTGACCGGCGCGCTCAACTGGATCGCCCACTGGTACGACCCCAGGGGCGCGCTCGGCGCCGAGGACGTGGCGGACGCCGCCGTCGCGACGCTCGTCGGCGGCCTCGCCCCGCGTCGCTTGCAGGGAGAGCGCTGA
PROTEIN sequence
Length: 213
VASSAKALWPSVEDRERERREKREAVLHAAVRSFNEKGFHATSLDDVANALNVTKPTIYHYFANKDEILFECVRRGLDSIRHAAEAVESEGGGGLERLRRLMRDYAIIMTRDFGMCVTRTADHELSGDSRAKFRALKREIDQTVRRVVEQGMADGSIAGGDPRLVTFTLTGALNWIAHWYDPRGALGAEDVADAAVATLVGGLAPRRLQGER*