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SCN18_10_11_15_R4_B_scaffold_2364_13

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 8273..8701

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 142.0
  • Bit_score: 170
  • Evalue 1.10e-39
UPI0003D03FCF related cluster n=1 Tax=unknown RepID=UPI0003D03FCF similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 143.0
  • Bit_score: 167
  • Evalue 8.50e-39
Probable ribonuclease VapC 2 similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 142.0
  • Bit_score: 166
  • Evalue 4.10e-39

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGTTCCTTCTGGACACGAACGTCGTTTCGGCGCTCGCGCCGCATAATGTCGACCGCCATCCGGAACTGGTTGCCTGGATGCGCCGGAACGATCGGCTGCTTCGACTGTCGGTGGTCACCGCCTCGGAGGTGGAAGCCGGCATAGCCAAGGCTGTGAGGACGGGCGCGCGCGCCAAGTCGGCAAGTCTGCGCAAATGGTGGGCTGGTCTTGTCGAGCTTTACGACGACAGGATCCTGCAAGTCGATCTCCGGATCGCGGAAGCTGCCGGGCAGATGCTCGATGAGGCGCGCGCGCACGATCCAGGCTACGAGGACATCCTCATCGCTGCCACGGCCAGGGTCCACGGCATGACAGTGCTCACCCGCAACGAGCGGCATTTCGCTCCGCTCGGCGTGGACGTCGTCGATCCCTTCGTCCGGCTTCCCTGA
PROTEIN sequence
Length: 143
MFLLDTNVVSALAPHNVDRHPELVAWMRRNDRLLRLSVVTASEVEAGIAKAVRTGARAKSASLRKWWAGLVELYDDRILQVDLRIAEAAGQMLDEARAHDPGYEDILIAATARVHGMTVLTRNERHFAPLGVDVVDPFVRLP*