ggKbase home page

SCN18_10_11_15_R5_P_scaffold_55_76

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(77459..78397)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2K742_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 311.0
  • Bit_score: 331
  • Evalue 5.70e-88
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EJL76015.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 311.0
  • Bit_score: 331
  • Evalue 8.10e-88
NMT1/THI5 like domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 311.0
  • Bit_score: 329
  • Evalue 8.10e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAAAAGCCTGATGAAGGGCCTCGCCGTCGCCGTGCTGGCGGCCGGCGTCGCGTTTAGCGCTTCGGCGCAGACCAAGATCAATCTCGGCTACACCGCCGTCAGCGATTTCGCCTCGGTCTTCGTGGCGAAGGAAGAAGGCTATTTCGCCAAGAACGGCCTCGATGTCGACCTGACGCTGATCGGCCTCAATTCGACGATCCCCGCCGCGATCATGGCGGGCTCGCTGCAGGTGGGCGGGCCGACCCCGTCGGTGATGCTGCAGGCGATCGACGGCGGCCTCGATCTCGTCGCCATCGCCGAGGCGGCGGTGACGGCCAAGTCGACCGCCTCGGCGGTCGCCGTCGTCGGCAACCCGAAGGCCAACATCAAGGGGCCGAAGGATTTCGTCGGCAAGAAGGTCGGCGCCCCCGGCCTCGGCGCGTTCCTGCATGTGCTGTTCCGCCAGTGGCTGATCGCCAATGGCGTCGATCCGAAGCAGGTCACCTTCATCGAGGTCGGCTTTCCGACGCAGAACGACGTGCTGAAGGCCGGCACCGTCGACGCGGTGATCACCGCCGATCCGTTCAAGGTGCGCATCCTGTCGTCGGGCGTCGGCGTGCTGATCTCGAACTTCCTGGCCGACCTGCCCGAGGGCCAGCCCTCGATCCTCTATGCCTCGACACGCGAATGGGCGACCAAGAACCCGGCGGCGGTCAAGGGGTTCCAGGCCGCGCTGGCCGAGGCGGTGACCTTCATCAAGGCCGATCCGAACATGGCCAAGACCCGCGAGCATATCGCCAAGTACATCAAGCTGCCGCCCGAGGTGATGAAGGCGATCCAGATCTCCGAGCCGTCCTCGGTCGTCACCGAAGCCCAGCTCGCCTGGTGGATCGAGGTCATGCAGAAGCAGGAAATGCTGCAGACCAAGCTCGATCCCGCCAAGCTGATCGTGAAATGA
PROTEIN sequence
Length: 313
MKSLMKGLAVAVLAAGVAFSASAQTKINLGYTAVSDFASVFVAKEEGYFAKNGLDVDLTLIGLNSTIPAAIMAGSLQVGGPTPSVMLQAIDGGLDLVAIAEAAVTAKSTASAVAVVGNPKANIKGPKDFVGKKVGAPGLGAFLHVLFRQWLIANGVDPKQVTFIEVGFPTQNDVLKAGTVDAVITADPFKVRILSSGVGVLISNFLADLPEGQPSILYASTREWATKNPAAVKGFQAALAEAVTFIKADPNMAKTREHIAKYIKLPPEVMKAIQISEPSSVVTEAQLAWWIEVMQKQEMLQTKLDPAKLIVK*