ggKbase home page

SCN18_13_7_16_R1_B_scaffold_434_31

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 41761..43869

Top 3 Functional Annotations

Value Algorithm Source
pbpC; Penicillin-binding protein 1C (PBP-1C); Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal); Transpeptidase-like module (C-terminal) (EC:2.4.2.-) similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 698.0
  • Bit_score: 619
  • Evalue 6.70e-175
Penicillin-binding protein 1C (PBP-1C) Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal) Transpeptidase-like module (C-terminal) {ECO:0000313|EMBL:CDL00755.1}; EC=2.4.2.- {ECO:0000313|EMBL:CDL00755.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 698.0
  • Bit_score: 619
  • Evalue 3.30e-174
Penicillin-binding protein 1C (PBP-1C) Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal) Transpeptidase-like module (C-terminal) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5G6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 698.0
  • Bit_score: 619
  • Evalue 2.40e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2109
ATGATGAAGGCGTTCGCATGGTGCTGGCGAAAACCGCTGCTCGCGGTCGCGGGCGTTTTCTGCGCGCTCGTCATCGCCAATTTTCTGTTCCCGCCGGACATGACGCGGGTGCAGTTGCGCTCGACCGAGGTGTTGGACCGTCATGGCGAATTGCTGCGGCCGTTCCTCTCTAGGGATGGTTATTGGCGGCTGAAGACCACGGCCGCGGACGTCGATCCGCGTTATCTCGTCCTGCTCAAGGCCTATGAGGACAAGCGTTTCGATGCCCATCCCGGCGTCGATCCGCTGGCGCTGGCGCGCGCGGCCTGGCAATGGGCGGTGCGCGGCCATGTGGTGTCCGGTGCCTCCACCCTCACCATGCAGGTGGCCCGTCTTTTGGAGCCGGGGCGCCCGCGCACCGTGCCGACGAAATTCATCCAGATGGTGCGCGCCGTTCAACTGGAACTGCGCTATTCCAAGGATGACATTCTTTCCTTTTATCTGACGCTCGCGCCGTTCGGCGGCAATCTCGAAGGGGTGCGCGCCGCCTCGCTTGCCTATTTCGGCAAGGAGCCGCGTTCGCTTTCACTCTCCCAATCCGCATTGCTGGTGGCCCTGCCGCAATCGCCGGAGCGGCAGCGCCCCGATCGCCATCCCAAAGCGGCAAAGGCGGCGCGCGATCATGTGCTGGCGCGCATGGTGGAAGATGGCGTGGTCGCAAAAACGGATGCCGCTGTCGCGCTGCGCGATGCACCGCCTGCGGCCCGCCTTGCCATGCCGTTTGCCGCGCCGCATCTGGCGCAATTCCTGGCCGCCAAACATCCGGGCGAACGCATCCGCACCACCCTCGATGGGGGAATGCAGCGCGCGGCCGAACGGCTCGCGGCGCGCGAACACCTTTATATGGATGATGGCGCCAGCCTCGCCATCGTGGTGGCGGAGAACAAAAGCCATGCCGTGCGCGCCTATGTCGGCGGCACCGATTATTGGGGCAAGGCGGGCATGCTCGATCTGGCGCAGCGTGCGCGCTCGCCCGGTTCCGCGCTCAAACCTTTCATCTACGGCCTCGCGTTTGACGATCTCACACTTCATCCCGCCACCCTGATGCAGGATCAGGCGACGAATTTCGGTGATTACGCGCCACGCGATTTCGATGGGGAATTTCAGGGCGCGGTCACCGCGGGCAGCGCACTGCGCATGTCGCTCAATGTGCCGGCGGTGATGGTGCTTGAACGCATCGGGCCCTTGCGTTTCACCCAGACACTGGAAAATGCCGGCGCGCATCTCGCCTTTCCCACGCGTGATACGGTACCCAGCCTGCCGGTGGCGCTTGGTGGCCTCGGCATCAGCCTGGCCGATCTCACCATGCTTTATACCGGCATTGCCGATGGCGGCACGGTGGCGCCGTTGCGGTATCTCGCCGATGCACCGCAGGGCCGCGCCCATCGCCTGTTCGGCCCGGTTGCCGCCTATTATCTGCAGCAGATTCTCTCCACCGTGAATCTGCCGCAGGGCTGGGCGATGGGGCAGGGGCTGAAACGCCCGCGCAATATCGGCTTCAAGACCGGCACCTCTTACGGTTTTCGCGATGCGTGGTCGGCCGGTTTCTCGAACGATTACACGGTCGGTGTCTGGGTCGGCCGGGCCGACGGTGCGCCGCGCGCGGGTCAGGTCGGTGTCGATACCGCGGCCCCCATTCTGTTGCAGATGTTCGATCTGTTGCCGCCCGACCGGCGCGGGCCCCCGCCTGTGCCGGATGGCGTGATCCGCGCCGCCAATGCAGCGGCGTTGCCACCGGCCTTGCGCGTGTTCCGCCGCGCGGAAGACAATCATCAGGCAGTTGCCACGCGCGTAGCACCGCCCGCGATTGCCTTTCCACCCAATGGCGCGGTTGTGCCGTTGCCCGAGAATGCCGCTACGAATGGCCACGCGCCCGCGACCGTCACGCTCGCGGCGCAGGGCGGCCGTGCACCGCTGACATGGCTGGTCAATGGCCGCCTCGTGGGCAGCTTCGATCGTTTTCAACCGGCCAGTTTCACGCCCGATGGCGAAGGCTTTGCGCGTGTCACCGTGATCGATGCCGCGGGCCGCAGCGATACCGCACAAATCCGCTTCAAACGGATGCGTTAG
PROTEIN sequence
Length: 703
MMKAFAWCWRKPLLAVAGVFCALVIANFLFPPDMTRVQLRSTEVLDRHGELLRPFLSRDGYWRLKTTAADVDPRYLVLLKAYEDKRFDAHPGVDPLALARAAWQWAVRGHVVSGASTLTMQVARLLEPGRPRTVPTKFIQMVRAVQLELRYSKDDILSFYLTLAPFGGNLEGVRAASLAYFGKEPRSLSLSQSALLVALPQSPERQRPDRHPKAAKAARDHVLARMVEDGVVAKTDAAVALRDAPPAARLAMPFAAPHLAQFLAAKHPGERIRTTLDGGMQRAAERLAAREHLYMDDGASLAIVVAENKSHAVRAYVGGTDYWGKAGMLDLAQRARSPGSALKPFIYGLAFDDLTLHPATLMQDQATNFGDYAPRDFDGEFQGAVTAGSALRMSLNVPAVMVLERIGPLRFTQTLENAGAHLAFPTRDTVPSLPVALGGLGISLADLTMLYTGIADGGTVAPLRYLADAPQGRAHRLFGPVAAYYLQQILSTVNLPQGWAMGQGLKRPRNIGFKTGTSYGFRDAWSAGFSNDYTVGVWVGRADGAPRAGQVGVDTAAPILLQMFDLLPPDRRGPPPVPDGVIRAANAAALPPALRVFRRAEDNHQAVATRVAPPAIAFPPNGAVVPLPENAATNGHAPATVTLAAQGGRAPLTWLVNGRLVGSFDRFQPASFTPDGEGFARVTVIDAAGRSDTAQIRFKRMR*