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SCN18_13_7_16_R1_B_scaffold_75_16

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(17495..18499)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000380E9E4 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 327.0
  • Bit_score: 538
  • Evalue 3.30e-150
Stenotrophomonas maltophilia strain ZBG7B contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87738.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 334.0
  • Bit_score: 546
  • Evalue 2.20e-152
C4-dicarboxylate ABC transporter similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 335.0
  • Bit_score: 496
  • Evalue 5.30e-138

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGATCAATCGCAGAGGTTTCCTTGCCACCAGCCTGGGCGCGCTTGCCGCGCCGGCGCTGGTGGCCTGTTCGGGCAGCGGCCGCCAGGCCAGCGGCGATGGGCGCGTACTCACCGCCACCGACGTCCACGTGGCCGACTACCCCACCGTCACTGCGGTCAAGTGGATCGGGCAGGAGCTCGAACGCGAGACCGGCGGCCGGCTGCGGCTGGCGCAGTACCACTCCGGCCAGCTCGGCCGCGAGTCGGAGGCGATCGACATGGCGCGGTTCGGCGCCATCGACATCACCCGCGTCTATTCCGGCGCGCTGAACAATGCCTTCCCGCTGACCCAGGCGCTGTGCCTGCCCTACGTGTTCGACTCGGTCGCGCACATGCGCCGCGCGCTGGACGGCGGCATCGCCGATGCGGTGCTGGCCGGCTTCGAGAGCCGCGAGCTGGTCGGCCTGGCGATCTACGACTCGGGCGCGCGCTGCTTCTACAACACCAAGCATCCGATCGTGGAACCGGGCGACCTGCACGGCCTGAAGCTGCGCGTGGCCAGCTCGGACATCTTCCTGCAGCTGATGCGCCTGTTCGGCGCCAACCCGACGCCGATGTCGCTGGGCGACACGTTCTCCGGCATGGAGACGCACATGATCGACGGCGCCGAGAACAACATGCGCAGCTTCCACTCCAGCCGCCACTTCGAGGCCGCGCACTACTGGTCGGAAAGCCAGCATTCGTACGCGCCGGACGTGCTGCTGATGTCGCGGCGCAGCTTCGACGCGCTGGCGCCGGGCGACCGCCGCCTGCTGCTGGACCTGGCGCGGCAGTCGGTGCAGGTGATGCGCGGCGAATGGGATGCCTCCGAGGACAAGGCCCGCCAGGCGGTGCTCGCCCATGGCGTGAAAGCCAACGCGGTGGACATCGCCGCGTTCCGCGATGCCGCCGCGCCGCTGCTGCGCGACTACCTGCGCCAGCCGGAGATCGCCGCCCTGCACCGCCGCATCCGCGATTTCGCCTGA
PROTEIN sequence
Length: 335
MINRRGFLATSLGALAAPALVACSGSGRQASGDGRVLTATDVHVADYPTVTAVKWIGQELERETGGRLRLAQYHSGQLGRESEAIDMARFGAIDITRVYSGALNNAFPLTQALCLPYVFDSVAHMRRALDGGIADAVLAGFESRELVGLAIYDSGARCFYNTKHPIVEPGDLHGLKLRVASSDIFLQLMRLFGANPTPMSLGDTFSGMETHMIDGAENNMRSFHSSRHFEAAHYWSESQHSYAPDVLLMSRRSFDALAPGDRRLLLDLARQSVQVMRGEWDASEDKARQAVLAHGVKANAVDIAAFRDAAAPLLRDYLRQPEIAALHRRIRDFA*