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SCN18_13_7_16_R2_B_scaffold_14692_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 926..1714

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361AD79 similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 266.0
  • Bit_score: 350
  • Evalue 1.00e-93
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 266.0
  • Bit_score: 348
  • Evalue 5.40e-93
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 263.0
  • Bit_score: 332
  • Evalue 1.00e-88

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Taxonomy

CN-SCN_Microbacterium_27x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 789
GTGACCGCAGGCACGAAGACCACCACCCGCTCCACCACGAAGGACACCGTCGTCGACGACGCCGAAGTGGTCGAGGCCGCGACGGCGAAGCGCCCGGCGCGCAAGCCCGCCGCGGCGAAGACCGCGACCAAGAAGGCGGCGCCCAAGGCGGACGCGAAGGGCGCGGTCACCGAAGACGACGACATCGAGCTGGACGACGACCTCGACGTCGCGGATGTCGAGATCGACGACGTCGATGTGGATGCCGACGACAGCGACGACGACACGGACGCGGCGACGCCCGCGAAGAAGAAGGCGGCGGCGCCGGCCGATCCGGAGTCTTCCGACGATGAAGAGGACGACGAGGAGGAGGCCAAGCCGGCGTTCACGGAGCCTCTGCCCACCGGCGCCATCGTCATCTCGTCGAACGACGAGGATGACGTCCCGGTCTACTCCGCACAGATCACGGGCGCAACAGCAGACCCGGTGAAGGACTACCTGAAGCAGATCGGCAAGGTCCCGCTTCTGAACGCGGCCGAAGAGGTCGAACTCGCGATGCGCATCGAGGCCGGCCTGTTCGCCGAGGAGAAGCTGTCGCACATGTCCGCGGCGGAGAAGGCGACGCAACTCGGCCTCGACCTCCAGTGGGTCGCGCGCGATGGTCAGCGAGCGAAGTCTCACCTGCTCGGCGCGAACCTCCGACTGGTCGTGTCGCTCGCAAAGCGGTACACGGGTCGTGGCATGCAGTTCCTGGATCTGATCCAGGAAGGAAACCTCGGACTCATCCGTGCTGTCGAGAAGTTCGACTAC
PROTEIN sequence
Length: 263
VTAGTKTTTRSTTKDTVVDDAEVVEAATAKRPARKPAAAKTATKKAAPKADAKGAVTEDDDIELDDDLDVADVEIDDVDVDADDSDDDTDAATPAKKKAAAPADPESSDDEEDDEEEAKPAFTEPLPTGAIVISSNDEDDVPVYSAQITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEAGLFAEEKLSHMSAAEKATQLGLDLQWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDY