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SCN18_13_7_16_R5_B_scaffold_701

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_701_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..90)
DNA (90bp) protein (30aa)
N-carbamoyl-L-amino acid hydrolase {ECO:0000313|EMBL:KFC74748.1}; EC=3.5.1.87 {ECO:0000313|EMBL:KFC74748.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCN18_13_7_16_R5_B_scaffold_701_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(118..1404)
DNA (1287bp) protein (429aa)
Putative C4-dicarboxylate transport system, permease large protein transmembrane n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDB9_9RHOB
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KFC27669.1}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. CB2047.;"
TRAP dicarboxylate transporter subunit DctM
SCN18_13_7_16_R5_B_scaffold_701_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1401..1904)
DNA (504bp) protein (168aa)
C4-dicarboxylate transport system, permease small protein transmembrane n=1 Tax=Nitratireductor indicus C115 RepID=K2P385_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGJ18143.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_701_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1998..2987)
DNA (990bp) protein (330aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IMB3_BORPD
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGJ18145.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
TRAP-type C4-dicarboxylate transport system, periplasmic component
SCN18_13_7_16_R5_B_scaffold_701_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3158..3631)
DNA (474bp) protein (158aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0Y9_9BRAD
ybaK/ebsC protein
SCN18_13_7_16_R5_B_scaffold_701_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3850..4752
DNA (903bp) protein (301aa)
Metallo-beta-lactamase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LEV0_9PROT
Beta-lactamase-like protein {ECO:0000313|EMBL:KFC66551.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Metallo-beta-lactamase
SCN18_13_7_16_R5_B_scaffold_701_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4804..5430)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000360B7A2
Rhodanese domain protein {ECO:0000313|EMBL:CPR16820.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_701_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5471..5692)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGE8_XANP2
Transmembrane protein {ECO:0000313|EMBL:KJV11070.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_701_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5971..7047)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M14_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KFC66552.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_701_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7083..7460)
DNA (378bp) protein (126aa)
Regulatory protein ArsR n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFI2_XANP2
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KFC66553.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
regulatory protein ArsR
SCN18_13_7_16_R5_B_scaffold_701_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7457..7867)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130L1_RHOPS
Uncharacterized protein {ECO:0000313|EMBL:KFC66554.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_701_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7919..8659
DNA (741bp) protein (247aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRU7_RHOP2
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:KFC66555.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cytochrome c biogenesis protein, transmembrane region
SCN18_13_7_16_R5_B_scaffold_701_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8670..9242
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGM7_9BRAD
Thioredoxin SoxW {ECO:0000313|EMBL:KFC66556.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
twin-arginine translocation pathway signal
SCN18_13_7_16_R5_B_scaffold_701_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9334..9942)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLY9_9BRAD
Sulfur oxidation protein SoxX {ECO:0000313|EMBL:KFC66557.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_701_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9954..10787)
DNA (834bp) protein (278aa)
SoxAX cytochrome complex subunit A {ECO:0000256|PIRNR:PIRNR038455}; EC=1.8.2.- {ECO:0000256|PIRNR:PIRNR038455};; Protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Sulfur oxidizing protein A {ECO:0000256|PIRNR:PIRNR038455}; Thiosulfate-oxidizing multienzyme system protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfur oxidation protein SoxA n=1 Tax=Afipia birgiae RepID=UPI0003766CE8
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_701_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10960..11415
DNA (456bp) protein (152aa)
sulfur oxidation protein SoxY n=1 Tax=Afipia birgiae RepID=UPI00031E8FA8
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:KFC66559.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfur oxidation protein SoxY
SCN18_13_7_16_R5_B_scaffold_701_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11468..11797
DNA (330bp) protein (110aa)
sulfur oxidation protein n=1 Tax=Afipia birgiae RepID=UPI00031017C0
Sulfur oxidation protein SoxZ {ECO:0000313|EMBL:KFC66560.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative sulfur oxidation protein SoxZ
SCN18_13_7_16_R5_B_scaffold_701_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11953..12612
DNA (660bp) protein (220aa)
Sulfate thiol esterase SoxB n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRV4_RHOP2
Sulfate thiol esterase SoxB {ECO:0000313|EMBL:KFC66561.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
twin-arginine translocation pathway signal
Displaying 18 items

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