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SCN18_14_9_16_R1_B_scaffold_1592

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1592_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..213)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4P3_9RHIZ
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
segregation and condensation protein B
SCN18_14_9_16_R1_B_scaffold_1592_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(188..1006)
DNA (819bp) protein (273aa)
Segregation and condensation protein A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F0D3_9RHIZ
Segregation and condensation protein A {ECO:0000313|EMBL:EYR82402.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
segregation and condensation protein A
SCN18_14_9_16_R1_B_scaffold_1592_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1090..2109)
DNA (1020bp) protein (340aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Beta-hexosaminidase NagZ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CK87_9RHIZ
hydrolase glycosidase
SCN18_14_9_16_R1_B_scaffold_1592_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2209..5382)
DNA (3174bp) protein (1058aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D085_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82400.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1592_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5446..7206)
DNA (1761bp) protein (587aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Arginine--tRNA ligase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MBT3_RHISN
argS; arginyl-tRNA synthetase
SCN18_14_9_16_R1_B_scaffold_1592_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7274..8494)
DNA (1221bp) protein (407aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CE82_9RHIZ
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Deoxyguanosinetriphosphate triphosphohydrolase-like protein
SCN18_14_9_16_R1_B_scaffold_1592_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8713..9045
DNA (333bp) protein (111aa)
Iron-sulfur cluster insertion protein ErpA 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVN0_9RHIZ
Iron-sulfur cluster insertion protein ErpA 2 {ECO:0000313|EMBL:EYR82397.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hesB; putative iron-sulfur cluster insertion protein erpA
SCN18_14_9_16_R1_B_scaffold_1592_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9067..9864
DNA (798bp) protein (266aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EYR82396.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EYR82396.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Exodeoxyribonuclease III n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYH3_9RHIZ
xthA2; exodeoxyribonuclease III protein
SCN18_14_9_16_R1_B_scaffold_1592_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9899..10810)
DNA (912bp) protein (304aa)
Exopolysaccharide production negative regulator n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MBS8_RHISN
Exopolysaccharide production negative regulator {ECO:0000313|EMBL:EYR82395.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
exoR; exopolysaccharide production negative regulator
SCN18_14_9_16_R1_B_scaffold_1592_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11067..12227)
DNA (1161bp) protein (387aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FBH9_9RHIZ
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EHS49825.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Long-chain fatty acid transport protein
SCN18_14_9_16_R1_B_scaffold_1592_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12571..13827)
DNA (1257bp) protein (419aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Valine--tRNA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQS0_9RHIZ
valS; valyl-tRNA synthetase
Displaying 11 items

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