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SCN18_14_9_16_R4_B_scaffold_3027_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(4708..5316)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3Q3_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 200.0
  • Bit_score: 249
  • Evalue 1.90e-63
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 200.0
  • Bit_score: 249
  • Evalue 5.30e-64
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABD27520.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 200.0
  • Bit_score: 249
  • Evalue 2.60e-63

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCCAGACATCCGCGTGGAGAGGCCACGCGAAAGGCCATTCTGGCGGCCGCCGAGCAGGTGTTCGCCGATGTCGGCTATGAGGCCGCGCGGATGGAGGATGTCGCGCAGGTGGTGGGGATCCGCCGCCCGTCGATCGTCTATTATTTCCCGCGCAAGCAGGAACTCTACGACGCGGTAGAATCCGATCTGTTCGAGAAGATGCATGCCGCCAGCCGCCTCGCGCTGAAGGCGGCGCAAAGCCCGCTCGAGCGGCTGCTCGCGCTGCTCGATGCGTGGCTCGACTATATGGTGCAGCGCCCGACCGCGGCGCGCATCCTGCAACGGCTGGTCGCGGACGTGGCGCCGCGCCACGGCAATCCGGTGCGCTTTTCGGAGCTGGCGCTCAGCGATATCGAAATCGTCTTGCGAGAAGGTATCAGCGCGGGCTGCTTTCGCCCGGTCAATACGATGATGGTCATCAACGGGGTGGCGGCGGCGACCCTATTCTATGTCTGCAACGGCCGTCAGCTCGGAGATGACCGCGCTTACACGCCCTCCGACCCGGAAATGCTGCACGAATTCCGCGCGTTGCTCCACCGCACCTGCTGCGCAGCGGTGCTTGCCTGA
PROTEIN sequence
Length: 203
MARHPRGEATRKAILAAAEQVFADVGYEAARMEDVAQVVGIRRPSIVYYFPRKQELYDAVESDLFEKMHAASRLALKAAQSPLERLLALLDAWLDYMVQRPTAARILQRLVADVAPRHGNPVRFSELALSDIEIVLREGISAGCFRPVNTMMVINGVAAATLFYVCNGRQLGDDRAYTPSDPEMLHEFRALLHRTCCAAVLA*