ggKbase home page

SCN18_14_9_16_R4_B_scaffold_6478_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 2..760

Top 3 Functional Annotations

Value Algorithm Source
response regulator PleD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF62 similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 252.0
  • Bit_score: 308
  • Evalue 4.20e-81
response regulator PleD similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 242.0
  • Bit_score: 292
  • Evalue 1.20e-76
Response regulator PleD {ECO:0000313|EMBL:AJP74510.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 242.0
  • Bit_score: 292
  • Evalue 5.70e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
GACGAATTTACCTTGATGTTCCAGCCGCAGGTCTCGCTAGCCGCAGGCAAGGTGGTTGCGGCCGAGGCGCTGTTGCGCTGGCAGCATCCGATCGACGGCTTGCGCCTTCCTGCCAGTTTCATCGGCCGTGCCGAGGAAAGCGGGCTGATGATCGAGATCGGCGACTGGATGCTGGGGCGCGTCGCGCGGACGATCGCGCAATGGGCCGCGCTGGGTGTCGAGACGCGGCTGGCGATCAACATCAGCGCGCGGCAGATCGACCGGGTCGATTTCCTCCTGCGGCTCCACGCGGCGATGCGTGAGGCGGGGGCGCCGGGGCGGCTGCTCGAGCTGGAGATGAACGAGACGGTTGCGGCACACGCCCGCACCGATGCGATCGCGGCGATCGCGCTGCTGCGCGAGGACGGGGCGAGAATCGCGATCGACGGATTCGGCACCGGCGTGTCGAGCGTCGCGCGGCTGCGGCAATTGCCGATCGACCGGATCAAGCTCGATCGCAGCCTGACCGCGACGATCACCACCGATTCCGAGACCCGGCTGATCGCCGGCGCGCTGGTCGGGCTGATCCACGGGCTTGGCTGCGAGGCGGTGGCGGAAGGGGTGGAGACCCCGGCGCAGGTCGATCTGTTGCGCGTCATCGGGTGTGACGCGGTGCAGGGCTTCGGGGTCGCGCGGCCGATGGCAGAGGTCGATTTCCTCACCTGGTCGGCCGCGCTGGGCGGCCGCGCGCCGGAGGTCAGGCGCGCGTCGCTCGCGTGA
PROTEIN sequence
Length: 253
DEFTLMFQPQVSLAAGKVVAAEALLRWQHPIDGLRLPASFIGRAEESGLMIEIGDWMLGRVARTIAQWAALGVETRLAINISARQIDRVDFLLRLHAAMREAGAPGRLLELEMNETVAAHARTDAIAAIALLREDGARIAIDGFGTGVSSVARLRQLPIDRIKLDRSLTATITTDSETRLIAGALVGLIHGLGCEAVAEGVETPAQVDLLRVIGCDAVQGFGVARPMAEVDFLTWSAALGGRAPEVRRASLA*