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SCN18_14_9_16_R4_B_scaffold_8066_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1553..1834)

Top 3 Functional Annotations

Value Algorithm Source
integration host factor subunit beta n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB57A similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 92.0
  • Bit_score: 154
  • Evalue 4.90e-35
integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 92.0
  • Bit_score: 152
  • Evalue 5.30e-35
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 92.0
  • Bit_score: 152
  • Evalue 1.50e-34

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGATCCGATCCGAACTCGTCCAGCAGCTCGCAGAGACCAATCCCGAGCTTTCGTTGCGTGAGGTCGAGGAAATCGTATCAACCTTCTTCGACGAGATCGTCCGTCGGCTGGCCGAAAATGGCCGGGTCGAGTTGCGCGGTTTCGGCGCTTTTTCCACCCGCGCCCGCGATGCGCGCACCGGCCGCAACCCGCGCACCGGCGAGATGGTGGACGTGGACGCGAAGCGCGTTCCCTACTTCAAACCCGGCAAGGAAATGCGCCAGCGGCTTAACGTCGCTTGA
PROTEIN sequence
Length: 94
MIRSELVQQLAETNPELSLREVEEIVSTFFDEIVRRLAENGRVELRGFGAFSTRARDARTGRNPRTGEMVDVDAKRVPYFKPGKEMRQRLNVA*