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SCN18_14_9_16_R4_B_scaffold_8289_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1..804)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 280.0
  • Bit_score: 380
  • Evalue 1.30e-102
tRNA pseudouridine synthase B n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B437F3 similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 268.0
  • Bit_score: 409
  • Evalue 1.40e-111
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 268.0
  • Bit_score: 375
  • Evalue 1.10e-101

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAACGGCTGGCTCGTCATCGACAAGCCGTTGGGCACCGGATCGACCCAGGCGGTCGGCGCGGTCAAGCGTGCGCTGCGCACCGGCGGCTATGGCAAGGCCAAGGTCGGGCACGGCGGGACGCTCGATCCGCTTGCGTCGGGGGTGTTGCCGATCGCGCTGGGCGAGGCGACCAAGCTCGCCGGGCGGATGCTCGACAGCGACAAGAGCTACGATTTCACGATCAGTTTCGGTTCGGAAACCGACACGCTCGACGCCGAGGGCGTGGTGATCGCGACCAGCGACGCCCGCCCCACCGCCGCCGAACTTATCGCGGTGCTGCCGCGCTTCACCGGCCCGATCGCACAGGTGCCCCCGGCCTATTCGGCGCTCAAGGTGGACGGCGCGCGCGCCTATGACCTCGCGCGCGCCGGCGAGGAAGTGACGCTCGCCAGCCGCAACGTGACGATCCACGCGCTGACCCCGCACCCGCATGCCGATGGCGTGCTCGACGAAATCACGCTGACCGCCGCCGTCTCCAAGGGCACCTATATCCGCAGCCTCGCGCGCGATATCGCGCAGGCGCTTGGCACCGTGGGGCACGTCACTTATCTCAGGCGCACCAAGGCCGGGCCGTTCGACCTCTCCCAAGCGATATCGCTGGACAAATTGGCCGAAATCGCTATGGCCCACGCGCTTGAACACTCTCTCCTGCCGTTGAGGGCAGCGCTGGACGACATCCCGGCACTTTCCCTCTCCCCCGATCAGGCAGGGGCGCTCCGCCAGGGGCGTGTTGTGGTCGGGATCGTTGCCGAGGATGGCTTG
PROTEIN sequence
Length: 268
MNGWLVIDKPLGTGSTQAVGAVKRALRTGGYGKAKVGHGGTLDPLASGVLPIALGEATKLAGRMLDSDKSYDFTISFGSETDTLDAEGVVIATSDARPTAAELIAVLPRFTGPIAQVPPAYSALKVDGARAYDLARAGEEVTLASRNVTIHALTPHPHADGVLDEITLTAAVSKGTYIRSLARDIAQALGTVGHVTYLRRTKAGPFDLSQAISLDKLAEIAMAHALEHSLLPLRAALDDIPALSLSPDQAGALRQGRVVVGIVAEDGL