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SCN18_25_1_16_R1_B_scaffold_5487_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1411..2391

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic substrate-binding transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMT5_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 321.0
  • Bit_score: 508
  • Evalue 3.60e-141
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 323.0
  • Bit_score: 610
  • Evalue 2.50e-172
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein {ECO:0000313|EMBL:CDM22748.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 323.0
  • Bit_score: 610
  • Evalue 1.20e-171

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGTTCCAAGGCAAGAAATTCGCAGGATGGCTCGCGGCCGCGGCCCTGATCGGCGTGACGGCATCCGCGCCGGCGCTGGCGCAGACCACGCTGAAGATGGCCTACGCGCTGTCCGAGAATTCGCACTATGGCGCGGGCGCCGCCGCCTTCGCCAAGACCCTGGAAGCCAGCACGCCGGACTTCAAGATCCAGCAGTTCCCGAACAGCGCGCTGGGCGGCGAGCGCGAGGTCATCGAGGGCCTGCAGCTGGGCACCATCGACCTGGCCATCGTGTCCACGGGCGCCACGCTGAATTTCGTGCCGCAGACCGGGGTGTTCGACATTCCCTTCCTGTTCCGCGACCTGGCCCACGCGCGCAAGGTCCTGGACGGCAAGATCGGCCAGGACATGCTGGCCGAATTCCCCAAGCGCGGCCTGGTGGCCCTGGCCTGGGGCGAACAGGGCTTCCGCCACCTGACCAACAACGTCCGGCCGGTGAAGGAGCCCGCCGACATCAAGGGCCTGAAGATCCGCACGACGGAAAACCCGATCCACATCGCCGCCTTCAAGGAACTGGGCGTGCTGGCCACCCCCATGGCCTGGCCCGAAGTCGCCACCGCCCTGCAGCAGGGCACCATCGACGGCCAGGAAAACCCGCTGTCGGTGATCGTGTCCGTGAAGATGTGGCAGCTGCAGAAATACCTGTCTCTGACGGCGCACGTCTACGGCCCGGCGCTGATCCTGATGGCGCCTTCCGTGTATGACGGCCTGGACGACGCGGGCAAGGCGAAGTTCAAGGAAGCCGCCGCCGCCGGCGCCAAGGCCATGCGCGCCTACGTCGACCAGGTCGAGAAGGACGGCATCGAAACCCTGAAGTCCAACGGCATGCAGGTCAACACGGTGGACCACGCCGCCTTCGTCAAGGCGGTCCAGCCGGTCTATCCGCAGTACTACAAGCAGTTCGGCCAGGCGCTGGTCGAGTCCATCCGCGACACTCAATAA
PROTEIN sequence
Length: 327
MFQGKKFAGWLAAAALIGVTASAPALAQTTLKMAYALSENSHYGAGAAAFAKTLEASTPDFKIQQFPNSALGGEREVIEGLQLGTIDLAIVSTGATLNFVPQTGVFDIPFLFRDLAHARKVLDGKIGQDMLAEFPKRGLVALAWGEQGFRHLTNNVRPVKEPADIKGLKIRTTENPIHIAAFKELGVLATPMAWPEVATALQQGTIDGQENPLSVIVSVKMWQLQKYLSLTAHVYGPALILMAPSVYDGLDDAGKAKFKEAAAAGAKAMRAYVDQVEKDGIETLKSNGMQVNTVDHAAFVKAVQPVYPQYYKQFGQALVESIRDTQ*