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SCN18_25_1_16_R1_B_scaffold_6310_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1132..2049

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1ZPP0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 302.0
  • Bit_score: 509
  • Evalue 2.00e-141
Transcriptional regulator, LysR family, in glycolate utilization operon similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 305.0
  • Bit_score: 617
  • Evalue 1.90e-174
Transcriptional regulator, LysR family, in glycolate utilization operon {ECO:0000313|EMBL:CDM22697.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 305.0
  • Bit_score: 617
  • Evalue 9.40e-174

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
TTGAGCCGCTATACCGAGATACGCAGTTTTGTATTGATTGCAGAGCAGGGCAGCTTCGCCGCCGCGGCCCTGATCGAGGGCGTGACCCCGGTCATCATGGGGCGCCGCCTGACGGCGCTGGAAAAGCGCCTGGGGGTGCAGCTGATGCACCGGTCCACGCGCGGCCTGGTGCTGACGGACCTGGGCGAACGCTACCTGGAGCACTGCCAGCAGCTGATCCAGGATTTCGATGCCGCCGACGCCAGCATCATGTCCCGGGGCCGGTCGCTCGCCGGCCACCTGGTGGTGTCGGCGCCGGCCTCGTTCGGGCGCCTGCACGTGGCCCCGCATGCGCTGGCGTTCCGCGAGCGCTACCCGGACCTGGCGCTGTCCTTCAATTTCACCGACAGCGTGGTGGACCTGGTGCGCGAAGGCTACGACATGGCGATCCGCATCGGCGAGGTCACCGATCCGAACTACGTGGCGGTGCGCCTGTATCCGAACCGCCGCGTGGTCTGCGGCACGCCCGCCTATTTCGAGTCGCACGGCGTGCCGCGCGTGCCCGAGGACCTGGCGCGGCACAACTGCCTGGCCTTCAACCTCCAGGGCGGACAGCATCGCGGCTGGACCTTCGTGCGCGACGGCAAGCCCTTCGCCGTGCGGGTGCGCGGCGACCTGGCCTGCAACGACGGCGAACTGCTGTACCGCTGGGTGCGCCAGGGGCTGGGCATCGGCTGGCGATCCACCTGGGAGATCCAGCGCGAACTGAAGCGCGGCGAACTGGTGACGGTGCTCGACGAGTTCGCCCTGCCCGCCTACGATATCCAGGCCGTCTATCCGCAGCAGCGCTACCTGCCGGCCAAGGTGCGCTATTTCATCGACGACCTGAGAAGCCATTATCATGAGCCCGGTTATTGGGAAGGACAGAGATCATCTTGA
PROTEIN sequence
Length: 306
LSRYTEIRSFVLIAEQGSFAAAALIEGVTPVIMGRRLTALEKRLGVQLMHRSTRGLVLTDLGERYLEHCQQLIQDFDAADASIMSRGRSLAGHLVVSAPASFGRLHVAPHALAFRERYPDLALSFNFTDSVVDLVREGYDMAIRIGEVTDPNYVAVRLYPNRRVVCGTPAYFESHGVPRVPEDLARHNCLAFNLQGGQHRGWTFVRDGKPFAVRVRGDLACNDGELLYRWVRQGLGIGWRSTWEIQRELKRGELVTVLDEFALPAYDIQAVYPQQRYLPAKVRYFIDDLRSHYHEPGYWEGQRSS*