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SCN18_25_1_16_R1_B_scaffold_10162_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 2..238

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase (EC:1.1.1.85) similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 142
  • Evalue 3.50e-32
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 142
  • Evalue 1.70e-31
3-isopropylmalate dehydrogenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QQK9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 78.0
  • Bit_score: 129
  • Evalue 1.40e-27

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
CACGGTTCGGCGCCGGACATCGCCGGCCAGAACGTCGCCAATCCCCTGGCGACCATCCTGTCGGCGGCCATGATGCTGCGCTATTCCCTGGACGCGGCGCCCGCCGCCGACCGGATCGAGGCCGCCGTGCAGGCGGTGCTGGCCCGGGGCTTGCGCACGGCCGACATCTTCGAGGCCGGCACCACGCGGGTTTCGACCTCGGAAATGGGCGATGCCGTGCTGAAGGCATTAAACTGA
PROTEIN sequence
Length: 79
HGSAPDIAGQNVANPLATILSAAMMLRYSLDAAPAADRIEAAVQAVLARGLRTADIFEAGTTRVSTSEMGDAVLKALN*