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SCN18_25_1_16_R1_B_scaffold_10162_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1436..1684

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU38_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 56.0
  • Bit_score: 55
  • Evalue 1.60e-05
Collagen triple helix repeat similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 85.0
  • Bit_score: 119
  • Evalue 4.40e-25
Collagen triple helix repeat {ECO:0000313|EMBL:CDM24402.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 85.0
  • Bit_score: 119
  • Evalue 2.20e-24

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGAAAAAAATCCCCACGCCGTGCCTTCGACCCAAGACCACCCGACCCCAGCGCGCCGGACCCCGGCGGGCCGCCTGGCGGCCGGCGCCCTGGCGCTGGCCTTCCTGGCGGGCGGGGCGGCCCAGGCCGCGACCTTCGGCCATGCGCGCCTGGCCTCCGGAGCGGGCGAGCCGCTGCTGATCCTGGTGCCGGTCTCCGGCCTGACGGACGCCGACCTGCAGGCCTTGTCGGCCCGGCCCGCGCCGGCC
PROTEIN sequence
Length: 83
MEKNPHAVPSTQDHPTPARRTPAGRLAAGALALAFLAGGAAQAATFGHARLASGAGEPLLILVPVSGLTDADLQALSARPAPA