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SCN18_25_1_16_R1_B_scaffold_7312_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(3..536)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G568_HERAR similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 177.0
  • Bit_score: 155
  • Evalue 3.20e-35
RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 177.0
  • Bit_score: 323
  • Evalue 1.90e-86
RNA polymerase sigma-54 factor RpoN {ECO:0000313|EMBL:CDM23882.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 177.0
  • Bit_score: 323
  • Evalue 9.60e-86

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGGACACCCAGATCCAGCACGATCCGTCGGCCTCGGACGACCTCGCCCTGATCGGGCGCGCGGCGAACGGCGACCTGGCAGCCTTCGAAGCCCTGATGCGCCGCCACAACCAGCAGATATACCGGGCGGCGCGTAGCATCCTGCGCGACGAGGCCGAGGCCGAGGACGCCGTCCAGGAAGCCTGGTGGAAGGCCTACGTCCACCTGCGGGATTTCCGCTCGGAAGCCCGGCCCGCCACCTGGCTGACACGCATCGCCATCAACGAGGCCCTGATGCGGCGGCGGCGAAACAGATCGCGCGAAGCCCTCATCCAATCCGCATACCAGGCTCCGCACGAACAGGACACCATGCCGATGCACGACCCCGACACCGCGGCCCCCGCATCCGCCGGCCCCGACCAGATGGCCTGGCGCGCCGAACTGCGGCGCCGGCTGGAACGGCGCATCGACGAACTGCCCGACCTCTACCGCACGGTCTTCGTGCTGCGCGCCGTGGACGACATGCCGGCCGCCGAGGTCGCGGCCGTGCTGGAC
PROTEIN sequence
Length: 178
VDTQIQHDPSASDDLALIGRAANGDLAAFEALMRRHNQQIYRAARSILRDEAEAEDAVQEAWWKAYVHLRDFRSEARPATWLTRIAINEALMRRRRNRSREALIQSAYQAPHEQDTMPMHDPDTAAPASAGPDQMAWRAELRRRLERRIDELPDLYRTVFVLRAVDDMPAAEVAAVLD