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SCN18_25_1_16_R2_B_scaffold_3878_3

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(733..2256)

Top 3 Functional Annotations

Value Algorithm Source
GTP-binding protein Der n=1 Tax=Microbacterium barkeri RepID=UPI000318D305 similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 505.0
  • Bit_score: 898
  • Evalue 2.50e-258
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 505.0
  • Bit_score: 892
  • Evalue 1.90e-256
engA; GTPase similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 507.0
  • Bit_score: 879
  • Evalue 4.40e-253

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGGCCGCTGACGACGAGTACGAAGCCGCCCCCGACAACCTCGAGGAGAAGCTCGCCGACATCGACGACGAGCTCGCCGAACAGCGCGCGACCGCGCTGCGGGCATCCTTGGCGGACTACGAGCTCGAGGACGAGGACGCCGCGCTCCTGGCCGGCGTCGAGCTCGGCGAGGACGGCATCGAGTTCTCTCCGGCGCTCCCGGTCGTCGCCATCGTCGGGCGACCGAACGTCGGGAAGTCGGCGCTCGTCAACCGCATCCTCGGCCGTCGCGAGGCCGTCGTGGAGGACACCCCCGGGGTCACCCGCGACCGAGTGACGTACAAGGCCGAGTGGCTGGGGCGCCGGTTCACCATCGTCGACACGGGGGGCTGGGAGCCCGACGCGCGCGGCATCGACCGCTCCGTCGCCGCGCAGGCCGAGGTCGCGATCGATCTCTCTGACGTCGTGCTGTTCGTCGTGGACGCCATGGTCGGCGCCACCTCGACGGACGAGCACGTCGTCAAGCTCCTGCGCAAGAGCGGCAAGCCCGTCTTCCTCGTCGCCAACAAGATCGACGACGCCCGGCAGGAGCCGGAGGCCGCGGCGCTGTGGAACCTCGGCCTCGGTGAGCCGTATCCGGTCTCGGCGATCCACGGGCGCGGCGTCGCCGATCTGCTCGACAACATCATGAAGGTCCTGCCCGAGATCTCGGCTGTCGCGAAGCAGGAGATCGGCGGGCCGCGCCGCGTCGCGATCCTCGGCCGCCCGAACGTCGGCAAGTCGTCGCTCCTGAACAAGGCCGCCGGCGAGGAGCGCGTCGTCGTGAACGAGCTCGCCGGCACCACCCGCGACCCGGTGGACGAGATCGTCGAGCTCGGCGGGAAGCTCTGGCGTCTCGTGGACACCGCCGGCATCCGCCGCCGCGTCCACCTGCAGCAGGGCGCCGACTTCTATGCGTCACTGCGCACGTCGGCCGCGTTGGAGAAGGCGGAGGTCGCCGTCGTCGTGCTGGACGTCTCGGAGACGATCAGCGAGCAGGACGTGCGCATCATCGACATGGTGCTCGAGTCCGGACGCGCGCTCGTCCTCGCCTACAACAAGTGGGACCTGATGAACACGCCGGAGTTCGAGGACAAGGAGCGCCGGCGCTACCTGGAGCGCGAGATCGAGCAGGACCTCGCGCACGTCGCGTGGGCTCCGCGCGTGAACATCTCCGCGCGCACCGGCCGTCACCTCGACAAGCTCGTCCCGGCGCTGGAGACCGCGCTGGAGTCGTGGGACACCCGCATCTCGACGGGCAAGTTCAACGCCTTCCTCTCGGAGCTCGTCGCCGAGCACCCGCACCCCGTGCGCGGCGGCAAGCAGCCGCGCATCCTGTTCGGCACACAGGCCGGTACCCGCCCGCCGACGTTCGTGCTCTTCACGACGGGCTTCCTCGACCCCGGGTACCGGCGGTACATCCAGCGCCGGCTGCGCGAGCTGTACGGCTTCGAGGGGACGCCGATCGTCATCAACATGCGCGTGCGGGAGAAGCGCCAGCGCTGA
PROTEIN sequence
Length: 508
MAADDEYEAAPDNLEEKLADIDDELAEQRATALRASLADYELEDEDAALLAGVELGEDGIEFSPALPVVAIVGRPNVGKSALVNRILGRREAVVEDTPGVTRDRVTYKAEWLGRRFTIVDTGGWEPDARGIDRSVAAQAEVAIDLSDVVLFVVDAMVGATSTDEHVVKLLRKSGKPVFLVANKIDDARQEPEAAALWNLGLGEPYPVSAIHGRGVADLLDNIMKVLPEISAVAKQEIGGPRRVAILGRPNVGKSSLLNKAAGEERVVVNELAGTTRDPVDEIVELGGKLWRLVDTAGIRRRVHLQQGADFYASLRTSAALEKAEVAVVVLDVSETISEQDVRIIDMVLESGRALVLAYNKWDLMNTPEFEDKERRRYLEREIEQDLAHVAWAPRVNISARTGRHLDKLVPALETALESWDTRISTGKFNAFLSELVAEHPHPVRGGKQPRILFGTQAGTRPPTFVLFTTGFLDPGYRRYIQRRLRELYGFEGTPIVINMRVREKRQR*