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SCN18_25_1_16_R2_B_scaffold_2944_3

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 2146..2892

Top 3 Functional Annotations

Value Algorithm Source
GntR regulator-like protein n=1 Tax=Rhodococcus erythropolis RepID=Q8KRD9_RHOER similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 228.0
  • Bit_score: 118
  • Evalue 6.10e-24
Putative HTH-type transcriptional regulator yidP {ECO:0000313|EMBL:KJF24710.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.9
  • Coverage: 245.0
  • Bit_score: 120
  • Evalue 2.20e-24
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 241.0
  • Bit_score: 64
  • Evalue 3.80e-08

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCCGGATTTGAGCGAAGCGGCGGGGGATGCGGCCCGGCGACGACTGACCCTCCTGCTGCGCGCGGCTGTCGAGCGAGGTGATTTCGCCGAGGCCCGCCTCCCTTCCGACGAGGAGCTCGCCGAGTCCTATCAGCTTCCGCGAGCCGTGGTCCGCGACGCGCTCGCCGCTCTCGCCGAGATGGGGGTCGTGACGCGCGTCCGTGGCACGGGGACACGGGCGGGCGATCACCACGGCGCGGTCTTCAACCTGCTGTCGTTCCAGGGCACCTCGGGCGTACCGGAGTACCGGCTCCACCCTCGGGTCGTCGAGCGGACGGTCGTGCGAACCCCCGCGCTCGTCGCGGCACGGCTTCCGACCGCCGGAGACACGGTGCTGCGGGTCGAGTACCTGTCCATGCCGGGCGACGACGTCGACGGCATCTCGACCGGATACTTCGTGCTGCCCAAGTCGGAGGCGCTGCGTGACGCGGAGTTCGGCGAGAACCTCTACACGTTCCTGAGCGCCGGAGGTCTCACCGTGTCGGCCACGGACTTCGTGATCGGCGCGATCGATGCCGACCAGTACACGGCACTCCGGCTGCGGGCGAAGCCGTCGAGCGCTCTGCTGTTCGTCGAGCAGACGACGTTCGACGAGGCGGGCGACCCGCTGAGCTTCTCGCTCGCGGCGCTGCGGGGCGACCGCCTGGCCCTCTTCTCGCGGGCCCGTTCCACGGAGCCGGAGTCCCGTCCGTCGATCGCTGGATGA
PROTEIN sequence
Length: 249
MPDLSEAAGDAARRRLTLLLRAAVERGDFAEARLPSDEELAESYQLPRAVVRDALAALAEMGVVTRVRGTGTRAGDHHGAVFNLLSFQGTSGVPEYRLHPRVVERTVVRTPALVAARLPTAGDTVLRVEYLSMPGDDVDGISTGYFVLPKSEALRDAEFGENLYTFLSAGGLTVSATDFVIGAIDADQYTALRLRAKPSSALLFVEQTTFDEAGDPLSFSLAALRGDRLALFSRARSTEPESRPSIAG*