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SCN18_25_1_16_R2_B_scaffold_4466_6

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4250..4606)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003803AC7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 118.0
  • Bit_score: 208
  • Evalue 2.80e-51
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 118.0
  • Bit_score: 203
  • Evalue 1.60e-49
xerD; site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 118.0
  • Bit_score: 197
  • Evalue 1.40e-48

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 357
GGGGTCTTCGCCCGTGAGGCGGTGGACGCCTATCTGACCCGCGTGCGGCCGGATCTGGCGCGGCGCGGGCGGGCGACACCCCGCCTGTTCCTCGGAGCCCGAGGTGCGGCCGTATCGAGGCAGGGCGTGTGGCTCGTGATCCAGAACGCCGCAGCGCGCGCCGAGCTCACGGCGCATGTCTCACCGCACACGCTGCGCCATTCGTTCGCCACCCACCTGATGCAGGGCGGAGCGGACGTCCGCGTCGTGCAGGAGCTGCTCGGCCACGCGTCGGTGGCGACGACCCAGATCTACACGCACGTCAGCGTGGATGCTCTCCGCGACGTCTACGCAACATCGCATCCACGGGCGCGCTGA
PROTEIN sequence
Length: 119
GVFAREAVDAYLTRVRPDLARRGRATPRLFLGARGAAVSRQGVWLVIQNAAARAELTAHVSPHTLRHSFATHLMQGGADVRVVQELLGHASVATTQIYTHVSVDALRDVYATSHPRAR*