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SCN18_25_1_16_R2_B_scaffold_2844_1

Organism: SCN18_25_1_16_R2_B_Microbacterium_71_11

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3..533)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, LacI-family n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CUT1_CLAM3 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 271
  • Evalue 5.20e-70
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 271
  • Evalue 1.50e-70
Putative transcriptional regulator, LacI-family {ECO:0000313|EMBL:CAN02869.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 177.0
  • Bit_score: 271
  • Evalue 7.30e-70

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGGCATCGAAACGAGCGACGCTGGCCGATGTGGCGCGGCTGGCCGGTGTCTCGTCGACCACGGCATCCCTCATCCTCAACGGCAAGCCCGACACCAGGTTCTCGGCCGACGCCCACCGCCGGGTGCACGAGGCCGTGGCGCAGCTGGGGTACCGCCCCAACATGGGGGCGCGGGCGCTGCGGACCGACCGCTCCCTCACGATCGGGTTCATCTCCGACGTCGTGGCCACCACGCGTTTCGCGAGCGGACTCATCCGCGGTGCTCTGGAGGAGGCCGAGAACGCCGGTCACGTCGTCCTCGTCCTCGAGACGGGGGGAGACCCAGCGCGCGAGGTCGAGGCGGTGGGGGCGGTGCTGGACCGCCAGGTCGACGGCATCGTCTTCGCCACCATGCGCGCGCGCGAGCTCTTCGTGCCGCCGCTCCCCGACTCCACGCACGTCGTCATGCTGAACGTGACCAACTCGCAGTTCGGTGCGTCCGTCCTCCCCGACGAGGAGAGCGGCGGGCGCAGCGCGGTGGATCTCCTCGCG
PROTEIN sequence
Length: 177
VASKRATLADVARLAGVSSTTASLILNGKPDTRFSADAHRRVHEAVAQLGYRPNMGARALRTDRSLTIGFISDVVATTRFASGLIRGALEEAENAGHVVLVLETGGDPAREVEAVGAVLDRQVDGIVFATMRARELFVPPLPDSTHVVMLNVTNSQFGASVLPDEESGGRSAVDLLA