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SCN18_25_1_16_R5_B_scaffold_1170_7

Organism: SCN18_25_1_16_R5_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_14

near complete RP 48 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(4102..4677)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KLE8_METEX similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 90.0
  • Bit_score: 114
  • Evalue 1.20e-22
Transposase {ECO:0000313|EMBL:AKH99668.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 86.0
  • Bit_score: 114
  • Evalue 1.20e-22
transposase of ISMdi7, IS21 family (ORF 1) similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 90.0
  • Bit_score: 112
  • Evalue 9.50e-23

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
TTGGGTTCTCGACAGGGCACAAGATTATTCCTGGTCGATAGTTGGGGAGCCATCTGGGCGCTATCTCTGGATCTTGACGCGAAGCCCCGCTGTCACTTCAAAGCAATATGCTGCTCTCGTGCGCAGAGCAAAGTCGCTCGGTTACAACACCGCGTTACTGAGGCGGACGCAGCAATAGCCAAGCGCAACAGATCGACCTTCGGCGCGCCCTACGAGTTCGTCCGCGCGATCCGGCATGACAGCTCGGCGCTAGAAGGCCTCGATCTTGTTGTCGAAGATCCGCTGCATTATCTGGCGCGGATCGAGGAGAAACCGAACGCGCTCTACCACGCGGTGGCGCTCCAGGGCTGGGATCTACCCGAGACCTTCCAGCAACTGCGCCATCTGCTGGAGGCGGGGATGAGCAATCGCGGCAAGCGCGAGTTCATCCAGGTGCGGCGGCTGATGGAGGCCTTACCGCGCGAGGTCGTGTGCTTCGCTATCGGCGAGTTGCGATACAACGACCTCGAGCCAGCGACGAACTTGGGCTGGAACATGCCGCTGACACACCGGTTTCATCGGCACGGTCCACCATAG
PROTEIN sequence
Length: 192
LGSRQGTRLFLVDSWGAIWALSLDLDAKPRCHFKAICCSRAQSKVARLQHRVTEADAAIAKRNRSTFGAPYEFVRAIRHDSSALEGLDLVVEDPLHYLARIEEKPNALYHAVALQGWDLPETFQQLRHLLEAGMSNRGKREFIQVRRLMEALPREVVCFAIGELRYNDLEPATNLGWNMPLTHRFHRHGPP*