ggKbase home page

SCN18_25_8_15_R1_B_scaffold_537_18

Organism: SCN18_25_8_15_R1_B_SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7_59_10

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(16031..16276)

Top 3 Functional Annotations

Value Algorithm Source
DNA binding domain protein, excisionase family n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVL8_ACISM similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 46.0
  • Bit_score: 61
  • Evalue 3.80e-07
excisionase family DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 46.0
  • Bit_score: 61
  • Evalue 1.10e-07
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADW69547.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 46.0
  • Bit_score: 61
  • Evalue 5.30e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGTCCGATTTCAAGTTTTCAACGGAACCGTTCCTGGATAGCGATCAAGCCGCCGCTATCCTTCGCATTCACCCTAAGACCCTTCAACGTCTGGCCCGACACGGTCGCGTCATCGGGTACCGTGTCGGCAAGCTCTGGCGATTTCACCGTTCAGACCTTGAGGGCCGGAATGATGGCTTCGTTTCCACACTCGACTCCGACACTGCCGAGCGGTACGCTTTAAGTACCACTCGTGCCCGCAACTAA
PROTEIN sequence
Length: 82
MSDFKFSTEPFLDSDQAAAILRIHPKTLQRLARHGRVIGYRVGKLWRFHRSDLEGRNDGFVSTLDSDTAERYALSTTRARN*