ggKbase home page

SCN18_25_8_15_R1_B_scaffold_2717_3

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(1182..3239)

Top 3 Functional Annotations

Value Algorithm Source
PTS lactose transporter subunit IIC n=1 Tax=Leifsonia sp. 109 RepID=UPI00037C2A89 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 690.0
  • Bit_score: 1029
  • Evalue 0.0
PTS system, fructose-specific permease, transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 690.0
  • Bit_score: 993
  • Evalue 2.20e-287
PTS system, fructose-specific permease, transmembrane protein {ECO:0000313|EMBL:AAT88604.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 690.0
  • Bit_score: 993
  • Evalue 1.10e-286

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2058
GTGTCCGACACCATCACCCCCGCGCTCGTCGCGCTCGACGCCCCACTCGGCGCCGACAAGGCCGCCGTCATCCGTGCCCTGGCCAGGCTCGTCGTCGCCGAAGGCCGCGCGACGGATGCCGAGGCGCTCTTCGCCGACGCGTGGGAGCGGGAGGAGAAGGATGAGACCGGCCTGCCTGGCGGCATCGCCATCCCGCATGCGAAGAGCCCGGCCGTCACCGTCCCGTCCCTCGCCTTCGCGCGTCTGTCGCCCGGCGTCGACTTCGGCGCGCCGGACGGCCCCGCCGATCTCGTGTTCCTGATCGCGGCACCGGCCGACGCGGCGGAGGCGCACCTCGCCGTGCTCTCGAAGCTCGCTCGCAGCCTCATGCAGGAGGACTTCACCGCCGGGCTCCGCGCCGCGCGTACGCCGGAAGAGGTGGTGCACATCGTGCGCGTCGCCATCGGCGAGGAGGTGGGCGCGGCCGCACCGGCGCCGACGGCCGCCGCGCCGGCGGCTGTCGCGCCGAGCTCAGGGCCGGCGGCGACGGACGGACGCCCGATCCGGATCGTCGCCGTCACCTCCTGCGCCACCGGCATCGCGCACACGTTCATGGCCGCGGACGCGCTGACCGCCGCGGGCAAGGAGGCGGGCGTGGACCTCATCGTGGAGCCGCAGGGGTCGAGCGGATATCAGCCGCTGCCGCAGGAGGTCATCGAGGCCGCGGACGCCGTCATCTTCGCCAACGACGTCGATGTGCGGGAAGAGGGCCGGTTCGCCGGCAAGCCCGTGGTGCGATCCGGGGTGAAGCGCGGGATCGAGCAGCCGAAGCAGCTCGTCGCCGAGGCGGTCGCTGCCGCCGGGAACCCCGCCGCCGCTCGTGTCGCCTCCAGCGGATCGACCGCGGGGCCGACCTCGACCCAGAAGGTCTCGGCGGGACGCAACATCCAGCGGATCCTGCTGACCGGCGTCAGCTACATGATCCCGTTCGTCGCGGGCGGCGGACTGCTGATCGCGATCAGCTTCCTCCCGTTCCTCGGTGGATACGGCATCGCGCTCGCGCACGGCGACTCCGGCGTGAACAACGCCGTCTTCACGCTGACCCACTACGCGATCTGGAACCTGCCTCCCGAGGGACTCGGCTACTACCTCGGCGCCGTGGCGTTCCAGATCGGAGCGGTCGGACTCGGGTTCCTGGTCCCCGCACTGGCGGGCTACATCGCCTTCGCCATCGCCGACCGACCCGGCATCGCGCCCGGCTTCATCGCGGGGTCCATCGCGGTGTTCATGAACGCGGGCTTCCTCGGCGGACTCATCGGCGGCCTGATCGCCGGCTACGTGGCCTACCTGCTCGGAAAGCCGGCCGTGCCGCGCTGGCTCCGCGGTCTGATGCCTGTGGTGATCATCCCGCTCATCGCCTCCGCGATCTCGTCCGGGCTGATGCTGATCATCCTCGGCGCCCCGATCGCCTGGCTCATGACCCAGCTGACGAGCTTCCTCAACGGACTCACGGGAGCCGGGGCGATCGGCCTCGGCGTCATCCTCGGTCTGATGATGTGCTTCGACCTCGGCGGCCCCGTCAACAAGGTCGCCTACGCGTTCGCCGTCGCCGGACTGGCGGCGCAGTCGGACGCCAGCTTCCACATCATGGCGGCCGTCATGGCAGCCGGCATGGTGCCACCCCTCGCGATGGCACTGGCCTCGACGGTGCTCTACCGGCAGGGCTTCACCGCGGTCGAGCGGGAGAACGGCGCCGCGGCCTGGCTCCTGGGGCTGTCGTTCATCTCTGAGGGCGCCATCCCGTTCGCGGCCGCCGACCCGCTGCGCGTCATTCCGTCGAACCTGGTCGGCGGCGCCGTCACGGGAGCCCTGATCATGGCCTTCGGCGTCGGCTCCCGCGCTCCGCACGGCGGCGTGTTCGTACTCTTCGCCGTCGACCCGTGGTGGGCGTTCCTGATCGCTCTCGGAGCCGGTACGGTCGTGACAGCACTCATCCTCGTCGCGCTGAAGCGATTCGTCGGCCGTCAGCGTCCCGAGGCCGTCGTCGCGGACGGTGCTCCGGCACTCGCCACCGCCTGA
PROTEIN sequence
Length: 686
VSDTITPALVALDAPLGADKAAVIRALARLVVAEGRATDAEALFADAWEREEKDETGLPGGIAIPHAKSPAVTVPSLAFARLSPGVDFGAPDGPADLVFLIAAPADAAEAHLAVLSKLARSLMQEDFTAGLRAARTPEEVVHIVRVAIGEEVGAAAPAPTAAAPAAVAPSSGPAATDGRPIRIVAVTSCATGIAHTFMAADALTAAGKEAGVDLIVEPQGSSGYQPLPQEVIEAADAVIFANDVDVREEGRFAGKPVVRSGVKRGIEQPKQLVAEAVAAAGNPAAARVASSGSTAGPTSTQKVSAGRNIQRILLTGVSYMIPFVAGGGLLIAISFLPFLGGYGIALAHGDSGVNNAVFTLTHYAIWNLPPEGLGYYLGAVAFQIGAVGLGFLVPALAGYIAFAIADRPGIAPGFIAGSIAVFMNAGFLGGLIGGLIAGYVAYLLGKPAVPRWLRGLMPVVIIPLIASAISSGLMLIILGAPIAWLMTQLTSFLNGLTGAGAIGLGVILGLMMCFDLGGPVNKVAYAFAVAGLAAQSDASFHIMAAVMAAGMVPPLAMALASTVLYRQGFTAVERENGAAAWLLGLSFISEGAIPFAAADPLRVIPSNLVGGAVTGALIMAFGVGSRAPHGGVFVLFAVDPWWAFLIALGAGTVVTALILVALKRFVGRQRPEAVVADGAPALATA*