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SCN18_25_8_15_R1_B_scaffold_5525_4

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(2497..3000)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D9774E similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 167.0
  • Bit_score: 283
  • Evalue 7.30e-74
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDA04861.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 167.0
  • Bit_score: 273
  • Evalue 1.40e-70
livF; high-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 166.0
  • Bit_score: 240
  • Evalue 2.60e-61

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 504
CGCCCGGACAAGGTCGCCGCCCTCGGCATCGCGCACGTGCCGGAGGGTCGCGGCACGCTCACCGACCTGAGCGTCCGCGAGAACCTCCGCGTCGGCGCCTACCTGCGCAAGGATCGCAAGGGGGTCGCTGCGGACATCGACTACTGCCTCGACCTGTTCCCGCAGCTGCAGCACCGCATCCGCTCCAACGGATCCGCCCTGTCCGGGGGCGAGCAGCAGATGCTCGCGATCGCGCGGGCGGTGATGTCGAAGCCGCGGCTCCTCCTCCTCGACGAGGCGTCACTGGGGCTCGCGCCCGGCACCGCGAAGACCGTCTACGAGGCGATCGGGCGACTGCGCACGGATGCCGGGCTGTCGATGCTCGTCGTGGAGCAGAACGCCAACCTCGCCTTCACGCTCGTGGAGTCGGCCACCGTCCTGGAGACGGGCCGGAGCGTCCTGACCGGATCGACCGCTGAGCTGCGCGGCATGGACGAGATCCGCCGCGCCTACCTGGGAGGCTGA
PROTEIN sequence
Length: 168
RPDKVAALGIAHVPEGRGTLTDLSVRENLRVGAYLRKDRKGVAADIDYCLDLFPQLQHRIRSNGSALSGGEQQMLAIARAVMSKPRLLLLDEASLGLAPGTAKTVYEAIGRLRTDAGLSMLVVEQNANLAFTLVESATVLETGRSVLTGSTAELRGMDEIRRAYLGG*