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SCN18_25_8_15_R1_B_scaffold_9363_4

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(1477..1932)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 148.0
  • Bit_score: 194
  • Evalue 9.70e-47
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003052DF0 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 148.0
  • Bit_score: 198
  • Evalue 3.70e-48
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 147.0
  • Bit_score: 178
  • Evalue 1.10e-42

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 456
GAGGTCGTCGTGTCGCGATTCGACGTTCTGGCCGTGCGCCCGTCGCCCGATCACCTCGATCTCGACGTGGTCGTGGACTGCTCCAGCGGCACGTACATCCGCGCTCTCGCCCGCGACCTCGGCCACGACCTGGGGGTCGGGGGCCACCTCACCGCGCTGCGCCGCACGCGCGTCGGCGTGTTCGCCGTGTCCGACGCCTGCGCGATCGAGGACATCTCCGCGTCGCGGCTCCTCGCGCCCGCCCGGGTCGCGGCATCCGTCCTGCCCGTCCTCGACGTCGACGACGACCACGCGCGCGACCTCCGGCACGGCAAGCGCGTCGCGGGCATCGGCGCGAGGTTCGAAGGAGAACGTGCGGCCGCGGTGGATCCGGCGGGCGCCCTGGTCGGGATCGTCGAACGGCGGGGTGCTGAGGTCAAGAGCGTCATGAACATGCCGGAGGGGCTCGAGGGATGA
PROTEIN sequence
Length: 152
EVVVSRFDVLAVRPSPDHLDLDVVVDCSSGTYIRALARDLGHDLGVGGHLTALRRTRVGVFAVSDACAIEDISASRLLAPARVAASVLPVLDVDDDHARDLRHGKRVAGIGARFEGERAAAVDPAGALVGIVERRGAEVKSVMNMPEGLEG*