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SCN18_25_8_15_R1_B_scaffold_14663_2

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(98..1168)

Top 3 Functional Annotations

Value Algorithm Source
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:AAM94362.1}; EC=2.5.1.29 {ECO:0000313|EMBL:AAM94362.1};; TaxID=41986 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agromyces.;" source="Agromyces mediolanus (Corynebacterium mediolanum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 359.0
  • Bit_score: 293
  • Evalue 3.60e-76
Geranylgeranyl pyrophosphate synthase n=1 Tax=Agromyces mediolanus RepID=Q8KP36_AGRME similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 359.0
  • Bit_score: 293
  • Evalue 2.60e-76
geranylgeranyl pyrophosphate synthase similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 358.0
  • Bit_score: 261
  • Evalue 2.40e-67

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Taxonomy

SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
GTGATCCCCACCGACGAGGCCATCGCTCCGGCGACAGCGCTCGCCGAGGTGGAGCGCCGCATCGGCGCGTTCTTCGACGACGCACGCGCACGATCCCGCGACCGTCACCCCCGCTTCGAGGAGCTGTGGCTCGCGACGCGCGCCGCCGCGACCGGGGGGAAGCGCCTGCGCCCGCGGCTCGTCGTAGCCACGTACGTGCTGCTGGACGGCGCACCGCTGCCGCCCGCCATCGAGCTCGCCGTCGCGATCGAGCTGCTGCACACCGCGCTGCTCCTGCACGACGACGTGATCGACGGCGATGTCGAGCGCCGCGGCGCCCCCAACGTCGCCGGGACGTTCGAGCGGGCGGCCGTCGAGGCGGGCGCCTCCCGCCGGGTCGCTACGGGATGGGGCGTGAGCGCCGCGATCCTCGCGGGAGACCTGATGCTGACGTCCGCACTGCGCCTCGTCGCCGGACTCCGGGTCGACGAGGATCGGCGCGAGCGGATCGTCGATCTCGTCGACGAGAGCGTGTTCCGTGCGGCCGCGGGCGAGTTGGCGGACGTCGCCTACGCCTCCGGGCTCGACACGCCCTCGGCCTCCGCCATCCGGCAGATGATGGCCGACAAGACGGCGCACTACTCCCTGGAGCTGCCGCTCCGGGCCGCCGCGATCCTCGCGGGTTCCCCGGAGCCGCTCGGCGAGCGGCTCGGCGCCATCGGGCGTTCGCTCGGGCTCGTCTTCCAGATGCGCGACGATCTGCTCGGCGTGTTCGGACGGAGTGAGGAGACCGGGAAGAGCACGGTCGGCGACCTGCGGGAGGGCAAGCGCACGCTGCTGATCGCCTTCGCGGACGGGACCGCGGAATGGACGGCGGTCGCCGCGGATTTCGGGAACGCCGACCTCGACGAGGCCGGGGCGCAGCGACTCCGGGACGCGCTCGAGTCCTCGGGGGCCCGCGACCGGCTCGAGGCCGAGATGCGACGCGAGTGCGGGATCGCGCACCGGCTGATCGACGAGGCGGGGCTGCCGGACCGTCTCGCCCACCTGCTCGCGACCGAGGTGGACGACGCGGCCGAGCGGTGCGCATGA
PROTEIN sequence
Length: 357
VIPTDEAIAPATALAEVERRIGAFFDDARARSRDRHPRFEELWLATRAAATGGKRLRPRLVVATYVLLDGAPLPPAIELAVAIELLHTALLLHDDVIDGDVERRGAPNVAGTFERAAVEAGASRRVATGWGVSAAILAGDLMLTSALRLVAGLRVDEDRRERIVDLVDESVFRAAAGELADVAYASGLDTPSASAIRQMMADKTAHYSLELPLRAAAILAGSPEPLGERLGAIGRSLGLVFQMRDDLLGVFGRSEETGKSTVGDLREGKRTLLIAFADGTAEWTAVAADFGNADLDEAGAQRLRDALESSGARDRLEAEMRRECGIAHRLIDEAGLPDRLAHLLATEVDDAAERCA*