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SCN18_25_8_15_R1_B_Microbacterium_70_8

In projects: SCN18_25_8_15_R1_B  |  scn18_genomes

Consensus taxonomy: Microbacterium  →  Actinomycetales  →  Actinobacteridae  →  Actinobacteria  →  Bacteria

Description

SCN18_25_8_15_R1_B_concoct_032

Displaying items 1-50 of 961 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_25_8_15_R1_B_scaffold_17441
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 (100%)
1 1210 bp 69.59 6.82 99.67
SCN18_25_8_15_R1_B_scaffold_11218
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1687 bp 68.82 6.94 93.18
SCN18_25_8_15_R1_B_scaffold_4397
Species: CN-SCN_Microbacterium_27x (100%)
1 3669 bp 73.70 9.04 100.00
SCN18_25_8_15_R1_B_scaffold_17702
Species: CN-SCN_Microbacterium_18x (100%)
1 1197 bp 73.27 7.77 94.24
SCN18_25_8_15_R1_B_scaffold_14276
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1400 bp 71.71 8.04 99.86
SCN18_25_8_15_R1_B_scaffold_13715
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1445 bp 72.39 9.45 94.46
SCN18_25_8_15_R1_B_scaffold_14789
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1364 bp 68.91 9.79 96.77
SCN18_25_8_15_R1_B_scaffold_15548
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1312 bp 69.36 6.17 99.70
SCN18_25_8_15_R1_B_scaffold_17709
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1197 bp 74.02 7.52 99.75
SCN18_25_8_15_R1_B_scaffold_16366
Species: CN-SCN_Microbacterium_18x (100%)
1 1265 bp 73.68 6.64 74.70
SCN18_25_8_15_R1_B_scaffold_13206
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1489 bp 71.79 6.55 99.73
SCN18_25_8_15_R1_B_scaffold_10687
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1754 bp 68.42 7.61 99.89
SCN18_25_8_15_R1_B_scaffold_16880
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
1 1238 bp 69.22 7.15 90.63
SCN18_25_8_15_R1_B_scaffold_11236
Species: SCNpilot_BF_INOC_Solirubrobacterales_68_7 (100%)
1 1686 bp 71.71 7.47 99.82
SCN18_25_8_15_R1_B_scaffold_15301
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 1328 bp 70.78 7.12 78.39
SCN18_25_8_15_R1_B_scaffold_19400
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1120 bp 71.25 8.04 82.77
SCN18_25_8_15_R1_B_scaffold_22082
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1019 bp 70.56 6.48 89.21
SCN18_25_8_15_R1_B_scaffold_17464
Species: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 (100%)
1 1209 bp 70.80 7.07 99.75
SCN18_25_8_15_R1_B_scaffold_21281
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 1047 bp 74.40 7.59 91.40
SCN18_25_8_15_R1_B_scaffold_22086
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1019 bp 73.21 8.54 99.80
SCN18_25_8_15_R1_B_scaffold_8654
Species: CN-SCN_Microbacterium_37x (100%)
1 2056 bp 72.18 10.65 99.81
SCN18_25_8_15_R1_B_scaffold_20855
Species: CN-SCN_Microbacterium_18x (100%)
1 1062 bp 72.60 7.20 99.72
SCN18_25_8_15_R1_B_scaffold_10703
Species: CN-SCN_Microbacterium_18x (100%)
1 1753 bp 68.11 8.64 74.10
SCN18_25_8_15_R1_B_scaffold_22347
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1009 bp 69.97 8.62 99.90
SCN18_25_8_15_R1_B_scaffold_22604
Species: CN-SCN_Microbacterium_18x (100%)
1 1001 bp 73.53 7.94 99.80
SCN18_25_8_15_R1_B_scaffold_7947
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 2217 bp 72.89 7.51 100.00
SCN18_25_8_15_R1_B_scaffold_15316
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1327 bp 74.08 7.46 99.70
SCN18_25_8_15_R1_B_scaffold_17221
Species: CN-SCN_Microbacterium_200x (100%)
1 1221 bp 69.53 7.49 100.00
SCN18_25_8_15_R1_B_scaffold_21552
Species: CN-SCN_Microbacterium_18x (100%)
1 1038 bp 73.70 7.08 99.71
SCN18_25_8_15_R1_B_scaffold_13501
Species: CN-SCN_Microbacterium_18x (100%)
1 1464 bp 68.24 5.84 93.03
SCN18_25_8_15_R1_B_scaffold_15590
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1309 bp 72.50 8.71 99.69
SCN18_25_8_15_R1_B_scaffold_21567
Species: CN-SCN_Microbacterium_18x (100%)
1 1037 bp 71.26 7.96 99.81
SCN18_25_8_15_R1_B_scaffold_8171
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (100%)
1 2163 bp 71.10 6.45 99.86
SCN18_25_8_15_R1_B_scaffold_18645
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 1153 bp 69.12 6.76 55.94
SCN18_25_8_15_R1_B_scaffold_18134
Species: SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 (100%)
1 1176 bp 68.88 8.16 99.74
SCN18_25_8_15_R1_B_scaffold_15091
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1343 bp 66.72 5.92 74.16
SCN18_25_8_15_R1_B_scaffold_15093
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 1343 bp 68.65 9.38 93.15
SCN18_25_8_15_R1_B_scaffold_12619
Species: CN-SCN_Microbacterium_18x (100%)
1 1539 bp 73.36 7.70 80.51
SCN18_25_8_15_R1_B_scaffold_19709
Species: CN-SCN_Microbacterium_27x (100%)
1 1106 bp 73.60 4.48 99.82
SCN18_25_8_15_R1_B_scaffold_7989
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 2207 bp 69.05 9.72 99.91
SCN18_25_8_15_R1_B_scaffold_18919
Species: CN-SCN_Microbacterium_18x (100%)
1 1140 bp 71.05 8.16 93.68
SCN18_25_8_15_R1_B_scaffold_15872
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (100%)
1 1293 bp 69.91 6.61 99.77
SCN18_25_8_15_R1_B_scaffold_19209
Species: CN-SCN_Microbacterium_18x (100%)
1 1127 bp 69.30 5.86 98.49
SCN18_25_8_15_R1_B_scaffold_19211
Species: CN-SCN_Microbacterium_18x (100%)
1 1127 bp 74.18 4.92 99.82
SCN18_25_8_15_R1_B_scaffold_21603
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1035 bp 67.05 9.28 99.71
SCN18_25_8_15_R1_B_scaffold_8460
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 2097 bp 69.77 9.23 100.00
SCN18_25_8_15_R1_B_scaffold_21861
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1026 bp 72.32 4.68 99.71
SCN18_25_8_15_R1_B_scaffold_20150
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1089 bp 71.63 7.30 80.44
SCN18_25_8_15_R1_B_scaffold_20151
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1089 bp 68.96 10.61 96.14
SCN18_25_8_15_R1_B_scaffold_11569
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1648 bp 67.96 11.38 99.94
Displaying items 1-50 of 961 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.