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SCN18_25_8_15_R2_B_scaffold_2336_14

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 11099..12712

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination protein NusA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA60_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 538.0
  • Bit_score: 865
  • Evalue 2.50e-248
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 537.0
  • Bit_score: 1008
  • Evalue 3.30e-291
transcription termination protein NusA similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 538.0
  • Bit_score: 865
  • Evalue 7.00e-249

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1614
ATGGCCGTTAGTGCGAATCGCCTAGAGCTGCTGCAGATCGCCGATGCCGTCGCCCGTGAAAAGTCGATCGACCGCATGGTCGTGATCGAGGCGATGCAGGATGCCATGGAAAAGGCCGCCAAGGGCCGCTACGGCGCCGAGACCGAGATCAAGGTCGAGATCAATCCGCGCTCGGGTGAAACCCGCATGTGGCGCCTGCTGGAAATCGTCGACGAAGTCGAAGAGCCGAGCCGCCAGGTGAACCTCAAGTTTGCCAAGACCAAGTCTCCCGAAGCCAAGGTCGGCGATTTCCTCACCGAGCCGCTGCCGCCGATGGAATTCGGCCGCATCGCCGCCCAGTCGGCCAAGCAGGTCATCGTGCAGAAGGTGCGCGATGCCGAGCGTGACCGCATGTTCGAGGAATATACCGGCCGCGTCGGCGAAATCGTCAACGGCACCGTCAAGCGCGTCGAATACGGCAATGTGATCGTCGATCTCGGCCGTGGCGAAGCCATCATCCGCCGCGACGAACTGATCCCGCGCGAAATGTTCCGCTACGGTGATCGCGTCCGCGCCTATATCTATGACGTGCGTCGCGAACAGCGCGGTCCGCAGATCTTTTTGTCCCGTACGCACCCGCAGTTCATGGCAAAACTGTTCATGCAGGAAGTGCCCGAGATCTACGACGGCATCATCACCATCCGCTCGATCGCCCGCGATCCGGGCAGCCGCGCCAAGATCGCCGTGACCTCCAACGATTCCTCGATCGACCCGGTCGGCGCCTGCGTTGGTATGCGTGGTTCGCGCGTTCAGGCCGTGGTTGCCGAACTGCAGGGCGAAAAGATCGACATCATTCCCTGGACCGACACCATCGCCGATCTGGTGGTTTCCGCGCTCCAGCCGGCCGACGTGGCCAAGGTCGTTCTCGACGAGCAGGCCGAACGCATCGAAGTCGTGGTGCCCGACGAGCAGCTCTCGCTCGCCATCGGTCGCCGTGGCCAGAACGTGCGTCTTGCTAGCCAGCTCATCGGTTGGGATATCGACATCCTGACCGAACAGGAAGAGAGCGAACGCCGCCACAAGGAATTCACCGAACGCTCGACCCTGTTCATGCAGGCCCTTGACGTTGACGAGATGGTTGCCCAGCTACTGGCTTCGGAAGGTTTCTCCTCGGTCGAAGAGCTCGCCTATATCGAGCCCAACGAAATCGCCTCCATCGAAGGCTTTGACGAAGAGACCGCTGCGGAAATTCAGAACCGCGCTGCCGAATATCTCGCCGAGATCGATCGCAAGTTCGACGAAGAGCGTATCGCCCTCGGCGTCGACGACGAGCTCTACGAAATTCCGGGCCTCAATGCCGCGATGCTCGTGGCCCTGGGCAAGGAAGACATCAAGACCGTGGAAGACTTTGCCGGTTGCGCCGCTGACGATCTCGTCGGCTGGAGCGAACGCAAGGACGGGGAAACCAAGCGCTTTGAAGGTACCTTCAAGGACTTCCCCGTGAGCCGCGAAGAAGCCGAAGACATGATCCTCCAGGCGCGCCTGCGTGCCGGCTGGATCAGCGCCGAAGAAGTCGCCGCCCAGGAAGACGGTGCGGACGACGCTGGCGACGAAGCCGAGGAGGAGGAGGTCTGA
PROTEIN sequence
Length: 538
MAVSANRLELLQIADAVAREKSIDRMVVIEAMQDAMEKAAKGRYGAETEIKVEINPRSGETRMWRLLEIVDEVEEPSRQVNLKFAKTKSPEAKVGDFLTEPLPPMEFGRIAAQSAKQVIVQKVRDAERDRMFEEYTGRVGEIVNGTVKRVEYGNVIVDLGRGEAIIRRDELIPREMFRYGDRVRAYIYDVRREQRGPQIFLSRTHPQFMAKLFMQEVPEIYDGIITIRSIARDPGSRAKIAVTSNDSSIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWTDTIADLVVSALQPADVAKVVLDEQAERIEVVVPDEQLSLAIGRRGQNVRLASQLIGWDIDILTEQEESERRHKEFTERSTLFMQALDVDEMVAQLLASEGFSSVEELAYIEPNEIASIEGFDEETAAEIQNRAAEYLAEIDRKFDEERIALGVDDELYEIPGLNAAMLVALGKEDIKTVEDFAGCAADDLVGWSERKDGETKRFEGTFKDFPVSREEAEDMILQARLRAGWISAEEVAAQEDGADDAGDEAEEEEV*