ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1603_13

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(10723..11634)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, LysR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERQ8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 295.0
  • Bit_score: 357
  • Evalue 9.50e-96
Uncharacterized protein {ECO:0000313|EMBL:KKC38164.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 302.0
  • Bit_score: 501
  • Evalue 5.70e-139
LysR family regulatoy protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 299.0
  • Bit_score: 345
  • Evalue 8.10e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCACCTTTTGACAGCGTTACAGCGCGCCTTATTCTGCTTCTGGCCGAAACCGGCTCGATCGGTCGCGCCGCCGAGCGCGAGGGCATAGCCTCCTCCGCCGTCAGCCGGCGGGTTTCCGATCTGGAAGCGCGTCTTGGCGTCGTGCTGTTCGATCGCTCGGCCCAGGGGGTGAGGCTCACGAGTGCCGGCGAGGCCTATGCCGAAGGGTGTCGCACCGTGCTGCGCTCGATCGCCGACCTCGATGCGGTCATGGCCGAATTCGGCTCCGGCCAGCGCGGCAGCCTGCGGCTTGCCTGCACCTCGTCGGCCCTGACCGGGCGCCTCCCCGAACTTCTCGCGCGCTATGCGCAGCGCTTTCCCGGCATCGAAATCGCCATCTCCGAAATGGGGGCGGCCAAGGCCCTGCTGGCGCTCGACGAAGGCCGCGCCGATGTAGCGATCGTTTCGGACAATTATGATTTCGCCCGCTTCGATATCCGTCCCTTCGAAGATGAGCGGGTCTGGGTGCTGGCTCCGCCCGATCACCCGCTCGCCAAGTCGATAGAGCCGCGCAAGGCGCTCTCCTTCGAACTGGTCGTGCCCCATTCCATGGTCGGCGTGCATCATACCGGCTCGCTCGATCGTCTCCTGGTCGAGGCCGCCGACAAGCTTGGTCATCCGCTGGTCGAGACGCTGCGCGTGGAAAGTTTTCCCGCGCTGGTCCGTATGGTCGAGGCCGGGTTCGGCGTCGGCTTCCTGCGCTCGACAAGCCTGCATCTGCTTGCCGGGACCGACCTTGTCTGTGCGCCCCTCGCGGAAAGCTGGGCCATGCGGCAATTGCTGGTGGCGCGGCGCAAGTCGAGCCCGCAATCGGCGGCAATGAAGAGCTTTATTGCTCTCTGTGCAGAGACTTACGCACCCTCGAGCTGA
PROTEIN sequence
Length: 304
MAPFDSVTARLILLLAETGSIGRAAEREGIASSAVSRRVSDLEARLGVVLFDRSAQGVRLTSAGEAYAEGCRTVLRSIADLDAVMAEFGSGQRGSLRLACTSSALTGRLPELLARYAQRFPGIEIAISEMGAAKALLALDEGRADVAIVSDNYDFARFDIRPFEDERVWVLAPPDHPLAKSIEPRKALSFELVVPHSMVGVHHTGSLDRLLVEAADKLGHPLVETLRVESFPALVRMVEAGFGVGFLRSTSLHLLAGTDLVCAPLAESWAMRQLLVARRKSSPQSAAMKSFIALCAETYAPSS*