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SCN18_25_8_15_R2_B_scaffold_3489_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 4102..4986

Top 3 Functional Annotations

Value Algorithm Source
Lactose transport system permease protein LacF n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4P8_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 293.0
  • Bit_score: 428
  • Evalue 3.30e-117
Lactose ABC transporter permease {ECO:0000313|EMBL:KFL29640.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 296.0
  • Bit_score: 546
  • Evalue 2.00e-152
lacF; lactose transport system permease protein LacF similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 293.0
  • Bit_score: 428
  • Evalue 9.20e-118

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGGCGCAATCGGGTCTCGCGCGAAACGAGCAGGTGAGCGGCTGGCTCTTCATCATGCCCGCCCTGGTCCTTTTGGGCCTGTTCATGATCTATCCGATCCTGTGGTCGCTCTGGATGAGCTTTCAGGTCGGCCGCGGCATGGCGTTCAGCTTTGGCGGCCTCACCAATATCATCCGCCTGACGCAGGACCCGGTCTTCATCCGCGCCCTCACCAATACGCTGATCTTCCTGGCCATCCAGGTCCCGATCATGCTGATCCTGGCGCTGCTCTTCGCCAATGCGCTCAATGATTCAAAGCTCTGGGGCAGGGGCCTTTTTCGCACGGCCATCTTCCTGCCCTGCGTCACCTCGCTTGTCGCCTATTCCGTCGTCTTCAAATCCATGTTCGCTCAGGACGGCGTCATCAATCAGTTCCTGATGTTCGCCCACATCATCGCCAGTCCCATTCCGTGGCTGGCCGATCCCTTCTGGGCCAAGGTCGTCGTCATCTCCGCCATTACCTGGCGCTGGACCGGCTACAACATGATCTTCTATCTCGCCGCCATGCAGAACATCGACCGCTCGATCTACGAAGCGGCCAAGATCGATGGCGTCCCCGCCTGGGCACGCTTCTGGTACATCACCGTGCCGATGCTGAAGCCGGTCATTCTTTTCACCACGGTCATCTCGACCATCGGCACCCTGCAGCTCTTCGATGAGCCCAACCTGCTCACCCAGGGCGGTCCTTCGGATTCGACGCTGACCCTGTCGCTCTACATCTACAACCTGAGCTTCAAGTTCATGCCCAGCTTCGGCTACGCCTCGACGGTTTCCTACGTCATCGTGGTCCTCGTCGGCATTCTGAGCCTCATCCAGTTCCTCTTGGCCCGGGAGAAACGCGCATGA
PROTEIN sequence
Length: 295
VAQSGLARNEQVSGWLFIMPALVLLGLFMIYPILWSLWMSFQVGRGMAFSFGGLTNIIRLTQDPVFIRALTNTLIFLAIQVPIMLILALLFANALNDSKLWGRGLFRTAIFLPCVTSLVAYSVVFKSMFAQDGVINQFLMFAHIIASPIPWLADPFWAKVVVISAITWRWTGYNMIFYLAAMQNIDRSIYEAAKIDGVPAWARFWYITVPMLKPVILFTTVISTIGTLQLFDEPNLLTQGGPSDSTLTLSLYIYNLSFKFMPSFGYASTVSYVIVVLVGILSLIQFLLAREKRA*