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SCN18_25_8_15_R2_B_scaffold_3012_17

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(15286..15690)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPP9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 135.0
  • Bit_score: 142
  • Evalue 2.80e-31
RNA-binding protein S4 {ECO:0000313|EMBL:KFL29902.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 133.0
  • Bit_score: 235
  • Evalue 2.60e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 124.0
  • Bit_score: 137
  • Evalue 2.50e-30

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
TTGACAGGGCCGGGCGAGATACCGCTCCACAAGGAGCGGCTCGACCGGTTCCTGTTTTTCTCGCGCGCTGTCAAATCGCGCACACTGGCACAGAAAATCATCGAATCTGGCGCCGTTCGGGTCAATTCCGAGCGCACTGAGCGCACCGATCACAAGATCGGGGCGGGCGATGTGCTGACCATGTCGCTGCATGGCAAGATCCTGGTCTGGCGCATTCTGGACCCGGGGACCCGCCGCGGTCCCGCCAGCGAAGCCCAGGGGCTTTACGAGGACATTTCCCCACCACCGGTGCCGCGGGCCGAACAGTCTCCCTATGATGCCGCCATTGCCGAGCGGCCTGTGGGTGCGGGGCGTCCGACCAAGAAGGAACGGCGCGAGACCGACGCGCTCAAGCGCGACGACTGA
PROTEIN sequence
Length: 135
LTGPGEIPLHKERLDRFLFFSRAVKSRTLAQKIIESGAVRVNSERTERTDHKIGAGDVLTMSLHGKILVWRILDPGTRRGPASEAQGLYEDISPPPVPRAEQSPYDAAIAERPVGAGRPTKKERRETDALKRDD*