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SCN18_25_8_15_R2_B_scaffold_11377_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 1206..1811

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 201.0
  • Bit_score: 400
  • Evalue 9.10e-109
3-isopropylmalate dehydratase small subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 201.0
  • Bit_score: 349
  • Evalue 2.20e-93
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 201.0
  • Bit_score: 349
  • Evalue 6.30e-94

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAAAAATTCACCACACTGACGGGTGTCGCAGCGCCGCTGCCGATCATCAATATCGACACCGATATGATCATCCCCAAGCAGTATCTCAAGACCATCAAGCGCACCGGCCTCGGCACGGCTCTGTTTTCTGAGATGCGCTACAATGAAGACGGTTCGGAAAATCCCGAATTCGTGCTCAACAAGCCGGCTTATCGCCAAGCCAAGATCATCATCGCCGGTGACAATTTCGGCTGCGGTTCCAGCCGCGAGCACGCCCCCTGGGCGCTGGCCGACTTCGGCATTCGCTGCGTGATCTCCACCAGCTTCGCCGACATTTTCTATAACAACTGCTTCAAGAACGGCATCTTGCCGCTGGTCGTTTCGGCCGAGCAGCTGAAGCTCCTTCTCGACGACGCCGATCGGGGCTCGAACGCGACGCTCACCGTCGATCTCGAAGCCCAGACCATCAAGGGTCCGGACGGCGGCACGCTGCACTTCGACATCGACCCGGCCCGCAAGCACATCCTGCTCGAAGGTCTCGACGATATCGCCGGCACGCTGAAGTCCGATCCCGCCATTTCGTCCTTCGAGGGCAAGATGGCCTCCGAGCGCCCCTGGCTCTAG
PROTEIN sequence
Length: 202
MEKFTTLTGVAAPLPIINIDTDMIIPKQYLKTIKRTGLGTALFSEMRYNEDGSENPEFVLNKPAYRQAKIIIAGDNFGCGSSREHAPWALADFGIRCVISTSFADIFYNNCFKNGILPLVVSAEQLKLLLDDADRGSNATLTVDLEAQTIKGPDGGTLHFDIDPARKHILLEGLDDIAGTLKSDPAISSFEGKMASERPWL*