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SCN18_25_8_15_R2_B_scaffold_20454_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 349..882

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC24_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 177.0
  • Bit_score: 265
  • Evalue 2.20e-68
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 177.0
  • Bit_score: 335
  • Evalue 2.40e-89
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 177.0
  • Bit_score: 265
  • Evalue 6.20e-69

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCACGTACTGGCAAGAAACCGGTGGCCCCGGTTAACGGCGTTACGGTCACGATCAATGGTCGTGTCGTGTCCGCCAAGGGCCCGAAGGGCGAGCTGAGCCTCACGCTCATGGATATCGTCAATGTCGAGCAGGATTCGGACGGCCTCGTCGTCGTTCCCGCTAACGACTCCCGTGAAGCTCGTGCTGCTTGGGGCACCACCCGCGCGCTGATCCAGAACATGGTCACCGGGGTGAGCGCTGGTTTCGAAAAGAAGCTGGCGATCCAGGGCGTCGGTTACCGCGCTGCGCTGCAGGGCAAAGACGTCAAGCTCTCGCTCGGTTTCAGCCACGAAGTGGTCTATGCAGCTCCCCAGGGTATCACCCTGGCCGTGCCCGCTCCGACCGAAATCGTCGTCACCGGCATCGACAAGCAGCAGGTTGGCCAGGTTGCGGCCGAGATCCGCGGCTGGCGTCCCCCCGAGCCTTACAAGGGCAAGGGCGTGCGTTACGCCGGCGAGCAGGTCTTCCGCAAAGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRTGKKPVAPVNGVTVTINGRVVSAKGPKGELSLTLMDIVNVEQDSDGLVVVPANDSREARAAWGTTRALIQNMVTGVSAGFEKKLAIQGVGYRAALQGKDVKLSLGFSHEVVYAAPQGITLAVPAPTEIVVTGIDKQQVGQVAAEIRGWRPPEPYKGKGVRYAGEQVFRKEGKKK*