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SCN18_25_8_15_R2_B_scaffold_2010_13

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(10132..10317)

Top 3 Functional Annotations

Value Algorithm Source
Heme exporter protein CcmD n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J141_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 52.0
  • Bit_score: 55
  • Evalue 1.60e-05
Heme exporter protein CcmD {ECO:0000313|EMBL:KFC62931.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 57.0
  • Bit_score: 71
  • Evalue 2.90e-10
Heme exporter protein CcmD similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 52.0
  • Bit_score: 55
  • Evalue 4.40e-06

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGAGCGGCCTTTTCGATGCAATCGGGCCGCATGCCGGTTTCATCCTGGCATCCTACTGTGCCTCGGCAATCGTTCTCATCGGACTGACATTCGCGATCCTGCGCGATCACGCCGCACAGAAGCGGGCGCTTGATGCACTGGAGCGCCGCGGCGCCGGCCGCCGGTCGGGCCGGGGGGCGGCATGA
PROTEIN sequence
Length: 62
MSGLFDAIGPHAGFILASYCASAIVLIGLTFAILRDHAAQKRALDALERRGAGRRSGRGAA*