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SCN18_25_8_15_R2_B_scaffold_548_24

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 30512..32176

Top 3 Functional Annotations

Value Algorithm Source
SusD, outer membrane protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM63_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 559.0
  • Bit_score: 662
  • Evalue 3.30e-187
SusD, outer membrane protein {ECO:0000313|EMBL:EOR92818.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 559.0
  • Bit_score: 662
  • Evalue 4.60e-187
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 571.0
  • Bit_score: 545
  • Evalue 1.70e-152

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1665
ATGAAAAAGTTTTTTAAATATATATCACCCGTCTTATTTATTGTGACGATGGGCGCCTGCCATAAAATAGATGTAACACCAAAGTCTTTATATACAGAAGATGTTTTCCCGCAAACAGAAGAACAGTTCCAGGCGCTGATAGGACCGGTATACACCAGCTTGCGCGGGCATTTTGCACTAACCTATTTCTTTATGACGGAGTGCTCAACAGATGAGGCAATACTCCCTGCATTTGGCGGTAACTGGTATGATGGCGCCAGCTACGAAGCCCTGCACAGGCATGCCTGGACGCCAGACCATAACTGGGTAACTACAGCATGGAATGATGTTACGGGGCTGATAGGCACCTGCAATCAAACCCTGTATATTTTAAACAATGCTCCTGAAGGCGATGCTAAAAATACCAGTATGGCAGAAGTGAGAATGATAAGGGCTTATGCTTATTGGGAGCTGATGGACTTTTACGGAGGTGTGCCCTTAGATACCGTTTATCCAAGCCCGGGGCTCCAGGCGAGAGCAAGCCGTGCAGATATATTTAATTTTGTAGAATCAGAACTTAAGACGGTAATTCCATACTTAAAAACTGAGGTCGATGCTTCAACGTATGGCAAGCCTACCCAATATTTTGCATATTCGCTTTTGGCCAAATTGTATCTTAACGCGGAAGTATATACCGGCAGCGCCAAAAACGATGAGTGCATCGCGGCATGTGATGCTATTATTAGTTCCGGTAAGTATTCGGTACAGTCCCGGGATAGCTATTTGAAAATGTTTTATCCCGATAATGGACCAACAACACAGTCGGAATTTATTTTCGCAATACCTTACGATCCTTCTACCTCAAGCGGGTATTTGTTTTATGGGCGCTATGATTTAAACAGGAATTTGGGAATGAAGTACAAATATTCAGGCGCAACAGTAGGAACCAATGTTGATCCTGTTGTTAATCAAACTACAGGGAACGGGCTGGTAAACAGCAAGCCCAGCGGACCAAGAGCTACGCTGTCAACTTTTTTAGACTATTTCTTAGCTGATGAGAATGATATCAGGCTTAAACAATGGCTTTATGGTCCGCAATACTGGGATAATGGCAACCCTATTATGGTAAAAACAACCAACCTGGGTTATAACCAGTTTTATTCCGGATCAGATGGAGGCAGCAGCTATGTTTATCATTTAAACATAGATACTTCTATTAAGTTGAGACAAAATCCTGCATTGTTTGATTGCGGTAATGATGAAATAGCCTGGAACCAGGGCGCCCGGAATATTAAATTTTTCCCGGATGCAGGTTCAACCACCAGGAACCAAAACAATGATGCCCCTGTGTCGCGCTATTCGGATGTTTTATTGATGAAGGCAGAAGCCATTCTTCGTGGCGGCGCTGCTACCTCAGGACAAACAGCCTTGTCGCTTGTAAATATGGTTCGTGCAGAAAGAACAAAATCTCCCGGGTGGGCTTCTGTTGACCTGGAAGATCTTTACGAAGAAAGATGCCGTGAATTTGCATGGGAATGTTTGCACAGAAACGATATGATACGATTTGGAAAATATGAAAATTTATATGGCTTTAAAACCAATACAGATACTTATCGCAGATTATTCCCCATACCAACAACTGCAATTACAGCAAATGGTAAGCTGGAACAGAATACAGGATATTGA
PROTEIN sequence
Length: 555
MKKFFKYISPVLFIVTMGACHKIDVTPKSLYTEDVFPQTEEQFQALIGPVYTSLRGHFALTYFFMTECSTDEAILPAFGGNWYDGASYEALHRHAWTPDHNWVTTAWNDVTGLIGTCNQTLYILNNAPEGDAKNTSMAEVRMIRAYAYWELMDFYGGVPLDTVYPSPGLQARASRADIFNFVESELKTVIPYLKTEVDASTYGKPTQYFAYSLLAKLYLNAEVYTGSAKNDECIAACDAIISSGKYSVQSRDSYLKMFYPDNGPTTQSEFIFAIPYDPSTSSGYLFYGRYDLNRNLGMKYKYSGATVGTNVDPVVNQTTGNGLVNSKPSGPRATLSTFLDYFLADENDIRLKQWLYGPQYWDNGNPIMVKTTNLGYNQFYSGSDGGSSYVYHLNIDTSIKLRQNPALFDCGNDEIAWNQGARNIKFFPDAGSTTRNQNNDAPVSRYSDVLLMKAEAILRGGAATSGQTALSLVNMVRAERTKSPGWASVDLEDLYEERCREFAWECLHRNDMIRFGKYENLYGFKTNTDTYRRLFPIPTTAITANGKLEQNTGY*