ggKbase home page

SCN18_25_8_15_R2_B_scaffold_548_26

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(36136..37155)

Top 3 Functional Annotations

Value Algorithm Source
Phytanoyl-CoA dioxygenase (PhyH) n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7MXZ5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 335.0
  • Bit_score: 411
  • Evalue 8.10e-112
Phytanoyl-CoA dioxygenase (PhyH) {ECO:0000313|EMBL:EMR01303.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 335.0
  • Bit_score: 411
  • Evalue 1.10e-111
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 340.0
  • Bit_score: 391
  • Evalue 2.50e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGCCTGTTAACCGAAATGCGCTTATACGTTACCGTACTATTGATAAATGCCTGCAAAACCGCCGCCGCAAATGGACTATTGAAGATTTGATTAATGCCTGCTCAGAGGCATTATATGAATATGAAGGCATTGACAAACCAATAAGTATGCGTACCATACGGCTCGATCTGAACGCCATGCGCAGTGAACAACTGGGTTATAATGCGCCTATTATTGTAGTAGATAAAAAATATTATACGTATGAAGACGCAGACTATTCCATCACCAATATTCCTTTAACTACACAAGACCTGGGCATATTACAGGAAGTATCTCACCTGCTTCGCCAGTTTAAAGGCTTTAATCATTTTAATGAAGTAAGTGAAATGATCAATAAGCTGGAAGATAAGATTTATAGTGAGCAGCATCACCAGTCGCCGGTAATTGATTTTGAAAAAAATGAATTGCTTACCGGGCTGGAATGGCTGGATACTATATACAAGTGTATTATTGAAAAAACTACTACGGCTATTACTTATCAATCATTTAAGGCGCGGCAGGCGGGTGAGATAGTATTTTATCCTTACCTGTTAAAAGAATACCGCAACCGCTGGTTTGTATTGGGCATGCATAAAAAAGATAAGCAATTGCTTACGCTGGCGCTTGACAGGATACAAAATATTAAGCCGCTGCCTGTAGAACGATATAAAGAGCAACGTGATTTTAACGGCACTGACTATTTTAAAGACATCATTGGTGTATCGCGCAATAATCAGCCGCCGGTTACTGTAATGTTTTGGGCCGATCATCACCAGGCGCCCTATATTAAAACCAAGCCCTTGCATGAAAGCCAGCAGATAGTTGAAACAACAAAGGAGGGAATACTATTCAGCATAAAGGTAATCCCCAACCTTGAAATGGAACGTGAGCTGCTTGGTTTTGGAGAGGGACTAAGAGTAGTTGCTCCCAATAATTTGGTTAGAAAATTAAAGAAGCGAACTGAGAAAATGTTTGAGACGTACAGAGGCGGCGATAAATGA
PROTEIN sequence
Length: 340
MPVNRNALIRYRTIDKCLQNRRRKWTIEDLINACSEALYEYEGIDKPISMRTIRLDLNAMRSEQLGYNAPIIVVDKKYYTYEDADYSITNIPLTTQDLGILQEVSHLLRQFKGFNHFNEVSEMINKLEDKIYSEQHHQSPVIDFEKNELLTGLEWLDTIYKCIIEKTTTAITYQSFKARQAGEIVFYPYLLKEYRNRWFVLGMHKKDKQLLTLALDRIQNIKPLPVERYKEQRDFNGTDYFKDIIGVSRNNQPPVTVMFWADHHQAPYIKTKPLHESQQIVETTKEGILFSIKVIPNLEMERELLGFGEGLRVVAPNNLVRKLKKRTEKMFETYRGGDK*