ggKbase home page

SCN18_25_8_15_R2_B_scaffold_629_12

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(17995..19740)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=8 Tax=Leptospira interrogans RepID=K6IQQ3_LEPIR similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 588.0
  • Bit_score: 222
  • Evalue 9.10e-55
Putative membrane protein {ECO:0000313|EMBL:EMN44336.1}; TaxID=1088541 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii str. LNT 1234.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.0
  • Coverage: 587.0
  • Bit_score: 223
  • Evalue 7.50e-55
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 588.0
  • Bit_score: 221
  • Evalue 5.80e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1746
ATGCTGCTACTTCTCTTATCTTCTTTCCTTTTTGCTTTTATAACATTCAATATTGGTTATGGGATGCTTTATTTTATTAGTAAAAATAAGGGAAAGAGTAGTCCAAGCGTTTTTCGGTCAATTCTTTCCGGATTGATAATTTCATTTATCTATTTTAATTTTTGTTCTTTTTTTATAGCTGCCAATTACCTGCTTTTAATTCCACTGTTTTGTTCAGGCGTTTACGTTTTCATCCGGTTTAAAACATTTAGAGTTTTATGTAATAGTGCCTATTATTTTATTTCGCGTTCGTCAACAATTGAAAAAATAGCAGGAATTTTTGTGATTGCAGCTATTGTGGGATATTGGATCATTCCTCCAATTAATGCGGATAGCGGCGCTTATCATTATTTAACAATCGAATGGTATGAAAAATTTAAAGTAATTCCGGGATTGGCCAATCTGCATGGGCGATTTGGCTTTAATCCAGCATCTTTTATTTTGAGCGCTCCATACTGCTTTTCGAAAATTCTATCTTATACGTTTTATCCTGTAAACGGAGTACTGATTGTTTCATTTGTTCTTTGGTTGTATAATTTAATTGTGTTCTCCCATAGATATACAGAAAAAGTTTACCTTCTTTTTATCCTTTTATTTACTCTAAGGTTGCTTTTGGTAAATGTTTCCTCTCCATCATCAGATGCGCTTGCGGTAATTGTTGCTACTTACATTATACTAAGTACATTGAAGATATACACTTATAATACAGAAAATAGGTATGAGTTTTTTTTATTTTCTCTCATTTTATTCTCTGTCACAGTAAAATTAACTTTACTTCCATTACTTTTTTTACTCCCATTGCTTTTTATATCCAAAGTTATTTCTTTTCCGAGAACTACAATTTATTGTATTTCTGCAGGGGTTATTGTGATTCCGTGGCTGATGCGCAATTATTTAATGAGTGGTTATTTAATATATCCTCTTTCTATTTCCGATTTAGGGCTTTTGAAGCCGGATTGGAAGGTCCCTCAAGGAATTATTAGGTTAGATAACCTGTATATAAAATATGGACCTTATATGCTAAAGGAATCAATCCCCAATCAGCTCAAACTCTCTTTAATTCAAAGACTATGTAAGTGGGTTGTGATACAGTTTCAAAGCAAAATGTTTATTGAGCTCCTCTTGCTATTTTCTTCTCTTTTTTCATTTATATTTTGGTTTTTTATCATAAAGAGAAAAATTAAATTTAATAAGAATGTGTTTTATGTTTGGCTTATTACCTATGTTGGCACTCTGCTTTGGATCATAAAATCTCCGGATTATCGCTTCGGCAGCGTATATCTTATCATGACAATCTTTATACCTTTTGCTTTTTTATTTAAAAATCTGGTAAATATTGCTGCTGTTAGAAAAAGTTATTATGGGTTATTATTTATCGCTTGCCTGGTATCCATTTACTATTGCAATTCAGCACTTTCTGCTCCAACAACCTATCCGTTTACTTTTAAAGATATATGGTTATTTCCGCTAAGGGACATTAGATACAAAAGGAATGTTAGTTTTAATCCAAATCAGAAAGTAGTATTGAATGATGGGAAAACAATTCTTTATATTAGTTCGGAAAATGATGATTTGTGTTTGCATGTTTCATTGCCATGTATGCCCTGGAATTATGGAGTTGTAGAAATGAGAGGAGAAAAAATAACAGATGGCTTCAGGTTAACTAAAGATCTTATAAAGGAAAAACACCCTTTTCTGAATTATTAA
PROTEIN sequence
Length: 582
MLLLLLSSFLFAFITFNIGYGMLYFISKNKGKSSPSVFRSILSGLIISFIYFNFCSFFIAANYLLLIPLFCSGVYVFIRFKTFRVLCNSAYYFISRSSTIEKIAGIFVIAAIVGYWIIPPINADSGAYHYLTIEWYEKFKVIPGLANLHGRFGFNPASFILSAPYCFSKILSYTFYPVNGVLIVSFVLWLYNLIVFSHRYTEKVYLLFILLFTLRLLLVNVSSPSSDALAVIVATYIILSTLKIYTYNTENRYEFFLFSLILFSVTVKLTLLPLLFLLPLLFISKVISFPRTTIYCISAGVIVIPWLMRNYLMSGYLIYPLSISDLGLLKPDWKVPQGIIRLDNLYIKYGPYMLKESIPNQLKLSLIQRLCKWVVIQFQSKMFIELLLLFSSLFSFIFWFFIIKRKIKFNKNVFYVWLITYVGTLLWIIKSPDYRFGSVYLIMTIFIPFAFLFKNLVNIAAVRKSYYGLLFIACLVSIYYCNSALSAPTTYPFTFKDIWLFPLRDIRYKRNVSFNPNQKVVLNDGKTILYISSENDDLCLHVSLPCMPWNYGVVEMRGEKITDGFRLTKDLIKEKHPFLNY*