ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1260_27

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(26749..27717)

Top 3 Functional Annotations

Value Algorithm Source
EamA-like transporter family {ECO:0000313|EMBL:AIA17061.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 304.0
  • Bit_score: 307
  • Evalue 2.20e-80
DMT(Drug/metabolite transporter) superfamily permease id=4402472 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 308.0
  • Bit_score: 287
  • Evalue 9.80e-75
putative drug/metabolite-transporting permease similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 288.0
  • Bit_score: 285
  • Evalue 1.10e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 969
ATGAAAAATTATATCTACGATATTTACGACAGGGCAAGAGCGATCATTCAACCTGTTTATCTTCGTAATCAAAGCGACAGAACAAAAGCTATATTGGCCGTAGGGATTGTATGTTTTTTCTGGGGAACAACATGGCTCGCTTCAAAAAAAGGTGTTCAGCATATGCCCGCTTTGCAACTTGCAGGCTTCAGGCAACTATTTGCAGGAATACTTTATCTCATCTTCTTTTTTATTAAAGGCTTCCGGCTTCCCACCAAAGAGCAGTTTATTCAATTTTTATGGATGAGCTTGCTGATGATCGTTATTAATAACGGGCTCAGCACCTGGTCTATGAAATATATGCCGAGCGGGCTGGGCTCGGTAATAGGCGCCGCTTCACCCATATGGATTGCAATAATCAGCAGCTTTGTATTTAAAGAAACGAAGTTAAATGTAACTACAATCTCAGGGTTATTGCTTGGCGTAACAGGTATACTCATCATCTTTTCAGATTATATCCACGATCTTTTCAACTCTTCTTTTTCGCTGGGAGTGTTGCTGAATGTGGTAGCATCTATTACCTGGGCTTTCGGTACAATCTTCACGGTAAGAAACGCAAGGAATGTTAACCCCTATTTCAGCCTGGGCTGGCAAATGTTTATTGGTGGAATTGTATTACTCGCTGTTTCATTTTTTACAGGGCAATTCGCTTATCCCGCACATATTGATATTACTGCCTGGGGAGCTATAGCCTACCTTGTTATCATTGGCTCAATCATAACCTATTCTGCATTTATATATGCCCTTAAAAGGTTACCTGCCGCCCAGGTATCTATATATGCGTATGTGAATCCTATTGTGGCGGTAATAGTAGGCGCTATATTAAATGATGAAAAGCTCACGTTGATAATAACCGCAGGAACCCTTGTTACAATAGCGGGTATTTATTTGGTAAATACCGGGTTTAAAAAGGAAAAGATCACACGTTGA
PROTEIN sequence
Length: 323
MKNYIYDIYDRARAIIQPVYLRNQSDRTKAILAVGIVCFFWGTTWLASKKGVQHMPALQLAGFRQLFAGILYLIFFFIKGFRLPTKEQFIQFLWMSLLMIVINNGLSTWSMKYMPSGLGSVIGAASPIWIAIISSFVFKETKLNVTTISGLLLGVTGILIIFSDYIHDLFNSSFSLGVLLNVVASITWAFGTIFTVRNARNVNPYFSLGWQMFIGGIVLLAVSFFTGQFAYPAHIDITAWGAIAYLVIIGSIITYSAFIYALKRLPAAQVSIYAYVNPIVAVIVGAILNDEKLTLIITAGTLVTIAGIYLVNTGFKKEKITR*