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SCN18_25_8_15_R2_B_scaffold_3977_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 2296..3006

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAR0_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 233.0
  • Bit_score: 317
  • Evalue 1.10e-83
Chemotaxis protein CheY {ECO:0000313|EMBL:KIC89745.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 241.0
  • Bit_score: 321
  • Evalue 8.20e-85
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 233.0
  • Bit_score: 317
  • Evalue 3.10e-84

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 711
ATGCTGCGTTGCCTTGCAATAGATGATGAACCACTTGCGCTTGAATTATTGGAAGATAATATCAGCAAAGTGCCGTTTTTGGAGTTAACTGCCACATGCAGTAACCCGGTGGAGGCTATGAAGGTTTTGCAGGAAAAGCAGATTGACCTGATATTTCTTGATATACAGATGCCGAGGCTTACCGGTTTGCAGTTCTTGCAGAGTCTTGTGCAGAAGCCGATGGTTATTATGATTACGGCTTACGAAAAATACGCGCTGGAAGGATTTAATCTTGATGTGGTGGATTACCTCGTGAAACCGGTATCATTAGACAGGTTTATAAAATCGTGCAATAAGGCGTGGGAACTGCATCAGCTTAAAGAAAAAGCAAAATCCGCAACTGCTGCACAGCTTGATTATATTTTCGTAAACGCGGATTACAGCCTTATAAAAATAGTGTTATCAGATATTACCTGGATAGAAGGACTTAAAGATTACCTGAAAATCAACCTGCACAGTACCAATAAACCACTTATTGTAAGAATGGGCATGAAAAATATAGAAGATATGCTGCCTGCCGCCCAGTTTATCCGTATTCACCGCTCCTATATTATCTCAAAAAAATATATAACAGCGGTTCGTAAAAACTCTATATTTCTTGGGCAGATTGAGCTGCCCATCAGCAGTAATTACCGTGATGCCGTTACCGCCATTACCGGTTTTATAGGCTGA
PROTEIN sequence
Length: 237
MLRCLAIDDEPLALELLEDNISKVPFLELTATCSNPVEAMKVLQEKQIDLIFLDIQMPRLTGLQFLQSLVQKPMVIMITAYEKYALEGFNLDVVDYLVKPVSLDRFIKSCNKAWELHQLKEKAKSATAAQLDYIFVNADYSLIKIVLSDITWIEGLKDYLKINLHSTNKPLIVRMGMKNIEDMLPAAQFIRIHRSYIISKKYITAVRKNSIFLGQIELPISSNYRDAVTAITGFIG*