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SCN18_25_8_15_R2_B_scaffold_3916_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(2030..3475)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368CD2C similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 479.0
  • Bit_score: 424
  • Evalue 1.30e-115
Transporter {ECO:0000313|EMBL:KIC93720.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 480.0
  • Bit_score: 398
  • Evalue 1.10e-107
tolC; outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 473.0
  • Bit_score: 343
  • Evalue 8.30e-92

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1446
ATGCAAGCATTAGTAAAAAAAACAGCTATTGGATTGGTAATAGTTCTTTTCGCTGTTAAAGGAATTTCTCAAACTGACACAACAGGCGCTGCAACACTCACCCTGAAACAATGTGTTGACAGGGCATTATCCAACAATATACCTGTTAAACAAACAGGGTTGCTGGCAGACGCGGCAAAAGCAGACTGGCAGCAGGCTAAAGCAAATTTATTGCCCGATGTAAATGGTGGTTGGGGGTATGGCTGGAACCAGGGACGCGCCATTGACCCTTTTACGAATACATATATCAACCAACAGTTTGCTTCTTCCAATGTGGGTGTGAATGCAGGAATAACATTATTCAGCGGATTGCAGTTACAAAATCTTATTAAGCAAACAGGATATGCTTACAGAGCCAGTGAAATGGAATGGCAGCAATCGAAGGATAAACTTACACTTGATGTGATACTGGCTTATTTAACTGTTTTAAATAATGAAGATACCTGGCGCATCATGACTGAGCAAATGGAAGTGACCCGCAGGCAGGTGGAACGAATGGAGATATTGGTGGAGAAAGGCGTAAATGGAAGTTATTTGCTTTCTGATCTAAAAGGTCAGATGGCAAGTGATGAGATAAATACCATTACGGCATACAATGCATTGCAAACTGCTATATTGCAATTGTCGCAGTTGATGAATATCCCGTATAATAAAAATATACAGTTAGAAAGAATATCAGAAGGTACCCTACTCGAAGTATACCCGGCAACAGCAGAGCAGGTGTATGCATCTTCCCTGGAAAATCTCGCACAGGTTAAAGCTGTTGATTTAAGAGCAAAGAGTGCAGCAAAGAGTTTATCAGTTGCAAAAAGTGGCTATTATCCCTCACTCCGCTTAAATGGAAGTTTGAACAGTAATTATTCCAGCGTATCAAGCTCACTTTCACCAACAACAGTTACTGAAGTGGAAACGGGTGATTATGTAACGATCAACAATATTAAAAACCCTGTGCTGACACAACAACAAAACTACGCACCCCAAAAAATATCATACAACACACAAATGAAAAATAATGTGGGTACTTATGTGGGCTTGAGTCTGAATATCCCCATCTTTAATAATCTTCGCGTAACAACCAACGTTAAAAAAGCGAAATTGAATTCCCGCTATGCTGCTTACGAAGCCGAACAAACAAAGGTTGTTTTAAAGCAGAATATTGAAAAATCGCACCAGGACATGATATCTGCTTACGAAAAATACAAGGCATTACTGGAACAGGTGAACCAGTATAAAGAGTCATTCCGGTCAGCCGAAATACGATTTAACCTGGGTACGATTGTTTCTACAGAGTACCTGATCACTAAAAACAATTATGACCGGGCAAGGTTGAACCTTACCCAAACCTGGTACGAATATATTTTCCGTACACGAATACTGGATTTTTACCAGGGAAAGTTGAGTTTATAA
PROTEIN sequence
Length: 482
MQALVKKTAIGLVIVLFAVKGISQTDTTGAATLTLKQCVDRALSNNIPVKQTGLLADAAKADWQQAKANLLPDVNGGWGYGWNQGRAIDPFTNTYINQQFASSNVGVNAGITLFSGLQLQNLIKQTGYAYRASEMEWQQSKDKLTLDVILAYLTVLNNEDTWRIMTEQMEVTRRQVERMEILVEKGVNGSYLLSDLKGQMASDEINTITAYNALQTAILQLSQLMNIPYNKNIQLERISEGTLLEVYPATAEQVYASSLENLAQVKAVDLRAKSAAKSLSVAKSGYYPSLRLNGSLNSNYSSVSSSLSPTTVTEVETGDYVTINNIKNPVLTQQQNYAPQKISYNTQMKNNVGTYVGLSLNIPIFNNLRVTTNVKKAKLNSRYAAYEAEQTKVVLKQNIEKSHQDMISAYEKYKALLEQVNQYKESFRSAEIRFNLGTIVSTEYLITKNNYDRARLNLTQTWYEYIFRTRILDFYQGKLSL*