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SCN18_25_8_15_R2_B_scaffold_11341_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 1508..2236

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 235.0
  • Bit_score: 311
  • Evalue 6.70e-82
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 235.0
  • Bit_score: 311
  • Evalue 4.80e-82
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 235.0
  • Bit_score: 311
  • Evalue 1.30e-82

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 729
GTGATTGTGAATAAATTAAAGCCTGAAGTAATTTTTGATAATGATCACTTTGTAGCAGTTAATAAGCCCTCCGGATTACTATCCATTCCCGACAGGGAAGGAAAAGAAATTTCTTTAAAAACTATTTTAAAAGAAAAGTACGGAGATATATTCACCGTACACCGGCTTGATAAAGATACCAGTGGTATAATTGTTTTTGCAAAAGATGAACAGACACATAAATACCTTTCCGGGCTTTTTGAAAATCGTGAAACAAAGAAATATTATACAGGCCTTGTACATGGTATTCCTTCACATACAAGCGGTTCAATAGACGCCGGCATAATGGAACACCCCGGCAAAAAGGGAGTAATGGTTACCAATAAAAAAGGCAAACCTGCGCTTACAGACTATAAAGTGCTCGAAACCTTTGGAAACTATTCCTTACTGCAATTTCGCATACATACCGGCAGAACACACCAGATACGTGTGCATATGAAACATATCGGACATCCAATTGTATGCGATGTTATTTACGGCACTGCTGATCCTGTGCTGCTCTCATCTATCAAAAAGAAATTCAATCTCTCCAAATATGAAGAAGAAGAGCGTCCTCTTTTCAATCGTTTAGCGCTTCACGCCGAAAAACTGGAGTTTACTGACGAACAAAAAAAAGAATATACACTTGAAGCCCCTCAGCCAAAAGACATGAGAGCATTGTTGCAGCAATTGAGAAAATGGAAGAAATAG
PROTEIN sequence
Length: 243
VIVNKLKPEVIFDNDHFVAVNKPSGLLSIPDREGKEISLKTILKEKYGDIFTVHRLDKDTSGIIVFAKDEQTHKYLSGLFENRETKKYYTGLVHGIPSHTSGSIDAGIMEHPGKKGVMVTNKKGKPALTDYKVLETFGNYSLLQFRIHTGRTHQIRVHMKHIGHPIVCDVIYGTADPVLLSSIKKKFNLSKYEEEERPLFNRLALHAEKLEFTDEQKKEYTLEAPQPKDMRALLQQLRKWKK*